Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ppk [H]
Identifier: 182682584
GI number: 182682584
Start: 2329308
End: 2331404
Strand: Reverse
Name: ppk [H]
Synonym: XfasM23_2072
Alternate gene names: 182682584
Gene position: 2331404-2329308 (Counterclockwise)
Preceding gene: 182682585
Following gene: 182682583
Centisome position: 91.94
GC content: 51.65
Gene sequence:
>2097_bases ATGTCTAAATCTTCTCCCATTGAACCTGTTTCAGCATCTGATGTCAGCCAGCAGTTCCGTGATCCTGGGCTGTATTTGAA CAGGGAGCTATCACAGCTCGACTTCAATTTTCGAGTGTTGGCACAGGCATTGGATGAGCAGGTGCCGTTGTTAGAGCGGT TGCGCTTCCTGTGTATTTCTTGCACCAATCTGGATGAATTCTTCGAAATCCGTGTTGCTACCGTGCGCCATGCTCAGGAA TTCGGTTTGCCGCCAGCGCCTGATGGGATGAGACCGACGGTAATCCTCAACGCTGTTCACGACCTGACAACCAAACTCGT CCATGATCAGTACAACTGCTGGAACCAAGTGCTGTGTCCGGCACTTGCCTCCCTTGGAGTGGGTGTACTGAGTCATAACA GTTGGAACGTGCGTCAGAAACGTTGGCTACGTGGTTACTTTCGCAACGAAATCATGCCGGTGTTATCGCCACTTGGTTTA GATCCTGCGCATCCATTTCCGAAAATATTCAATAAAACCTTAAATATTGTGGTGGTACTTAACGGTATTGATGCTTTTGG TCGTGCTGGTCATTTGGCTATCGTGCGTGCCCCGCGTTCGTTGCCGCGTATTATCGAGTTGCCCCAACATCTGTCCAGAG ATGGCTCTCAAAACTTCGTCTTCTTGTCCTCAGTACTGTCTGCTTTTGTCGGTGAGTTGTTTCCTGGCATGGTGGTCAAG GGGGCTTATCAATTTCGGGTTACTCGTAATTCTGAATTGGTGGTGGATGAGGATGAAGTCGAGAATCTGGCGCTGGCGTT GCGTAATGAATTGGTGACCCGCGGTTATCGTCTTGCAGTCAGGTTAGAGATCGCTGAGGACTGCCCAATCCCGATTGTGC GTACATTACTGCAGAATTTTGGGTTGCAAGAAAACGCTGTATATCGGATTAATGGTCCTGTCAATCTGAGCCGAGTGAGT CAGGTCTATGACATGGTGTTGCGTCCGGAACTGAAATATCCCCCGTTCAATCCACGCACGGTGCGTAACAGTGATCACAT TTTCGAGATCATTGCCAAGGGGGATGTGTTGTTGTACCACCCCTACGATGCTTTTACCGCAGTCCTTGATTTGCTGCGTC AGGCGGCGGCTGACCCGGATGTACTGGCCATCAAACAAACCCTCTACCGTACCGGCAAGGATTCCACCATCGTTGATGCG CTGATCCAAGCCGCACGTAGTGGCAAGGATGTCACTGTGGTGGTTGAGTTGCGCGCGCGTTTTGACGAGGAAGCCAACCT CGGTTTGGCCGATAAGCTGCAGGAGGCTGGGGTACAAGTGGTCTATGGTGTGGTTGGTTACAAGACCCACGCCAAGATGT TGCTGATTGTACGCCGTGAGGGCCGCAAACTACGTCGCTACGTGCATTTGGGCACTGGCAACTACCATAGTGGTACGGCA CGGATATATACCGATTTGAGTTTGATGACGGCTAATGCGGCGATCGGTAAAGATGTGCATCAACTATTTCTGCAATTGTC TGGATTAGCACCCAAAATGAAGCTGGAGTGCTTATTGCAGTCCCCATTCACCCTGCATGCAGGGGTGTTGTTCCGGATCG AACGTGAGACCACGTTCGCCCGGAAGGGGTGCCCTGCCCGCATCGTTGCCAAGATGAATGCGCTGAATGAGCCACAGGTC GTACGCGCACTGTACGTCGCCTCGCAGGCGGGTGTGCAAATTGATCTGATTGTGCGTGGGGCTTGCACGTTGCGGCCTGG TGTGCAGGGTATATCCGAAAACATCCGCGTGCGTTCAATCGTCGGCCGCTTTTTGGAGCACAGCCGGGTGTATTGGTTTG CTAATAACGGTACGCCTGAACTGTTCTGCGCCAGCGCCGATTGGTTGGAGCGCAATTTGCTACGTCGGGTCGAGATCTGT TTCCCGATCTTGAATCCGGATTTGGCGAAACGTATTTATTCTGATGTTTTACAGAGTTACTTGGATGACAACCTCAATGC TTGGGAATTGGGGAGTGATGGCGTTTACCGGAAACTGCTCCCCGAGACAGATCATGCGCCATACTCGGCCCAGGCGGCTC TACTGGAGTCTTTATAG
Upstream 100 bases:
>100_bases GAAATAATCCTTGCTCGTGTGGCGTGGATTTACTGTGGCCTCACTGTTGTTCCTTCCTACTTATATTTCTTTCCTAGTCT CTTTTTTCTCAAGACGTTCT
Downstream 100 bases:
>100_bases ATGTTGCTTTGCACTATGCCGGTGATGTTTACAGCGCTGGCGGGATTTTCAGTTAGAATATGCCCTCTATGCCCAATACG TTGCCATCCTATCCCCCGCT
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MSKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRVATVRHAQE FGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCPALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGL DPAHPFPKIFNKTLNIVVVLNGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNFGLQENAVYRINGPVNLSRVS QVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYHPYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDA LIQAARSGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFARKGCPARIVAKMNALNEPQV VRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSIVGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEIC FPILNPDLAKRIYSDVLQSYLDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL
Sequences:
>Translated_698_residues MSKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRVATVRHAQE FGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCPALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGL DPAHPFPKIFNKTLNIVVVLNGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNFGLQENAVYRINGPVNLSRVS QVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYHPYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDA LIQAARSGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFARKGCPARIVAKMNALNEPQV VRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSIVGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEIC FPILNPDLAKRIYSDVLQSYLDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL >Mature_697_residues SKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRVATVRHAQEF GLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCPALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGLD PAHPFPKIFNKTLNIVVVLNGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVKG AYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNFGLQENAVYRINGPVNLSRVSQ VYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYHPYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDAL IQAARSGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTAR IYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFARKGCPARIVAKMNALNEPQVV RALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSIVGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEICF PILNPDLAKRIYSDVLQSYLDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=694, Percent_Identity=34.0057636887608, Blast_Score=368, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 78290; Mature: 78159
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCIS CCCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH CTNLDEFFEIRVATVRHAQEFGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGLDPAHPFPKIFNKTLNIVVVL HHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEE NGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK ECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCEEC GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNF CCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHC GLQENAVYRINGPVNLSRVSQVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYH CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEC PYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDALIQAARSGKDVTVVVELRAR CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECC FDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA CCCCCCCCHHHHHHHCCCEEEEHHHHHCCCCEEEEEEECCCHHEEHEEEECCCCCCCCCE RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFA EEEEEEHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEEEEECCHHHH RKGCPARIVAKMNALNEPQVVRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSI HCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCEECCCCHHHHHHCCHHHHH VGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEICFPILNPDLAKRIYSDVLQSY HHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL HCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCIS CCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH CTNLDEFFEIRVATVRHAQEFGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGLDPAHPFPKIFNKTLNIVVVL HHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEE NGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK ECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCEEC GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNF CCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHC GLQENAVYRINGPVNLSRVSQVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYH CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEC PYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDALIQAARSGKDVTVVVELRAR CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECC FDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA CCCCCCCCHHHHHHHCCCEEEEHHHHHCCCCEEEEEEECCCHHEEHEEEECCCCCCCCCE RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFA EEEEEEHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEEEEECCHHHH RKGCPARIVAKMNALNEPQVVRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSI HCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCEECCCCHHHHHHCCHHHHH VGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEICFPILNPDLAKRIYSDVLQSY HHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL HCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]