Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ppx [H]
Identifier: 182682583
GI number: 182682583
Start: 2327713
End: 2329248
Strand: Reverse
Name: ppx [H]
Synonym: XfasM23_2071
Alternate gene names: 182682583
Gene position: 2329248-2327713 (Counterclockwise)
Preceding gene: 182682584
Following gene: 182682582
Centisome position: 91.86
GC content: 55.34
Gene sequence:
>1536_bases ATGCCCTCTATGCCCAATACGTTGCCATCCTATCCCCCGCTGAAGGACGGTGACCTCTTGGCCGCCATTGATCTTGGCTC CAATAGTTTCCACATGGTGGTTGCACGTTATCTGCTCGGTCAGTTACACGTGGTCGATCGTCTCCGTGAAGCAGTGCGTA TTGCCGATGGACTTGATGCTAAAGGGGGATTGTCGAGCAAGGCATGTGAGCGTGCACTCGAATGCTTGGCGCGCTTTGGT CAGCGTCTGCGTAATATGCCTTCTCCCCATGTGCGTGCTTTGGCTACCAATACGGTGCGTCGACTCCGTTCGCCGCAGGC CTTCCTGGTGTTGGCTGAGACCGCCTTGGGACATTCGATTGAGGTTGTCAGTGGCCGCGAAGAGGCGCGTCTGATTTATC TTGGTGTTGCCCATGCGCAGCCACCCCGATTGGATCAGCATCGGTTGGTGATTGATATTGGTGGCGGCTCGACTGAATTT ATCATCGGTAAAGGCTTCGAGCCTCTGGAGCGAGAGAGCTTACAGGTCGGGTGTATCGCCAGTACGCGGCGTTTTTTCCC AGAGGGTAAATTGTCCAAAAAGCGGTGGAATGATGCACTGACTGAGATCGGTACTGAGTTTCAACAATTTGCGGCTCAAT ACAATGCATTAGGTTGGCAGGAGGCACTGGGTTCCTCGGGGACGCACAAAACGATTGCCAAGATCTGCACGGAGATGAAG CTTGCCAAGGGGGAAATCACCGCCGAAGCGTTGCCTGTATTGCGTGAGGAACTACTCAAAGCCAAGCGTATTGAAGATAT TCATTTGCCTGGTTTGTCTGCTCATCGCCGTCCCATCATCGCTGGTGGAATATTGGTGCTGGAGGCCGTGTTTCAGACGC TTGGCCTGGAAAAGCTGTTGGTCAGCAAGGCAGCAATGCGTGAGGGTATCCTCTACGACATGCTCGGCCGAGCTGGTGAC AACGACCCGCGTGACACATCGGTGGCCGTGTTGATGCACCGCTATGCCATTGACGAACAGCAAGCGTTGCGTGTGGAGAC GACTGCACAGCTCCTGTTCCAGCAGGCGTGTGGTCCCTGGGCCTTGGATGCTGACGATGCCCGTGTGCTTTGTTGGGCGG CGCGCTTGCATGAGTTGGGGTTAGTGATTGCGCATAGTCACTACCACGTGCATGGCAGCTACGTGCTGGAGCATTCCGAT ATTGCAGGTTTCTCTCGCCAGGAGCAGCAAGTACTAGCTGTGCTCGTGTGTACGCATCGTCGTCATGTGTCGAAGAACGC GTTTGACGTGTTACCTGACCGCCTACGGGTGTCGGTTCGCCGCAGAGCTGCGCTGCTGCGTCTGGCGGCATTGCTGCATC GTGCGCGCGAACCCGATTGGGTGCCTACGTTGAATCTGCATGTCGATGGCGATGTGCTGATGTTGACCGTTCCCAAGGGG TGCTTGGCCTCACGGCCGCTGCTGCATAGTGACTTGAATGCAGAGGTTGAAGCAATGGTGGATTTAGGAATCGTGTTCAA ACTGTCTGTCGTTTGA
Upstream 100 bases:
>100_bases CGCCATACTCGGCCCAGGCGGCTCTACTGGAGTCTTTATAGATGTTGCTTTGCACTATGCCGGTGATGTTTACAGCGCTG GCGGGATTTTCAGTTAGAAT
Downstream 100 bases:
>100_bases GACAGATGCTGTGTACGGTTGAGCGTACCGTATTGTTGCGCATGCGGTTTTTGACTTATCTTCCATGCTGATATGGGCAA GAGAGTGCGTTGTTCGTTGC
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MPSMPNTLPSYPPLKDGDLLAAIDLGSNSFHMVVARYLLGQLHVVDRLREAVRIADGLDAKGGLSSKACERALECLARFG QRLRNMPSPHVRALATNTVRRLRSPQAFLVLAETALGHSIEVVSGREEARLIYLGVAHAQPPRLDQHRLVIDIGGGSTEF IIGKGFEPLERESLQVGCIASTRRFFPEGKLSKKRWNDALTEIGTEFQQFAAQYNALGWQEALGSSGTHKTIAKICTEMK LAKGEITAEALPVLREELLKAKRIEDIHLPGLSAHRRPIIAGGILVLEAVFQTLGLEKLLVSKAAMREGILYDMLGRAGD NDPRDTSVAVLMHRYAIDEQQALRVETTAQLLFQQACGPWALDADDARVLCWAARLHELGLVIAHSHYHVHGSYVLEHSD IAGFSRQEQQVLAVLVCTHRRHVSKNAFDVLPDRLRVSVRRRAALLRLAALLHRAREPDWVPTLNLHVDGDVLMLTVPKG CLASRPLLHSDLNAEVEAMVDLGIVFKLSVV
Sequences:
>Translated_511_residues MPSMPNTLPSYPPLKDGDLLAAIDLGSNSFHMVVARYLLGQLHVVDRLREAVRIADGLDAKGGLSSKACERALECLARFG QRLRNMPSPHVRALATNTVRRLRSPQAFLVLAETALGHSIEVVSGREEARLIYLGVAHAQPPRLDQHRLVIDIGGGSTEF IIGKGFEPLERESLQVGCIASTRRFFPEGKLSKKRWNDALTEIGTEFQQFAAQYNALGWQEALGSSGTHKTIAKICTEMK LAKGEITAEALPVLREELLKAKRIEDIHLPGLSAHRRPIIAGGILVLEAVFQTLGLEKLLVSKAAMREGILYDMLGRAGD NDPRDTSVAVLMHRYAIDEQQALRVETTAQLLFQQACGPWALDADDARVLCWAARLHELGLVIAHSHYHVHGSYVLEHSD IAGFSRQEQQVLAVLVCTHRRHVSKNAFDVLPDRLRVSVRRRAALLRLAALLHRAREPDWVPTLNLHVDGDVLMLTVPKG CLASRPLLHSDLNAEVEAMVDLGIVFKLSVV >Mature_510_residues PSMPNTLPSYPPLKDGDLLAAIDLGSNSFHMVVARYLLGQLHVVDRLREAVRIADGLDAKGGLSSKACERALECLARFGQ RLRNMPSPHVRALATNTVRRLRSPQAFLVLAETALGHSIEVVSGREEARLIYLGVAHAQPPRLDQHRLVIDIGGGSTEFI IGKGFEPLERESLQVGCIASTRRFFPEGKLSKKRWNDALTEIGTEFQQFAAQYNALGWQEALGSSGTHKTIAKICTEMKL AKGEITAEALPVLREELLKAKRIEDIHLPGLSAHRRPIIAGGILVLEAVFQTLGLEKLLVSKAAMREGILYDMLGRAGDN DPRDTSVAVLMHRYAIDEQQALRVETTAQLLFQQACGPWALDADDARVLCWAARLHELGLVIAHSHYHVHGSYVLEHSDI AGFSRQEQQVLAVLVCTHRRHVSKNAFDVLPDRLRVSVRRRAALLRLAALLHRAREPDWVPTLNLHVDGDVLMLTVPKGC LASRPLLHSDLNAEVEAMVDLGIVFKLSVV
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=444, Percent_Identity=38.5135135135135, Blast_Score=303, Evalue=2e-83, Organism=Escherichia coli, GI48994966, Length=475, Percent_Identity=34.3157894736842, Blast_Score=271, Evalue=9e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 56414; Mature: 56283
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSMPNTLPSYPPLKDGDLLAAIDLGSNSFHMVVARYLLGQLHVVDRLREAVRIADGLDA CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KGGLSSKACERALECLARFGQRLRNMPSPHVRALATNTVRRLRSPQAFLVLAETALGHSI CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCEE EVVSGREEARLIYLGVAHAQPPRLDQHRLVIDIGGGSTEFIIGKGFEPLERESLQVGCIA EEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHCCEEEEEEH STRRFFPEGKLSKKRWNDALTEIGTEFQQFAAQYNALGWQEALGSSGTHKTIAKICTEMK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH LAKGEITAEALPVLREELLKAKRIEDIHLPGLSAHRRPIIAGGILVLEAVFQTLGLEKLL HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHH VSKAAMREGILYDMLGRAGDNDPRDTSVAVLMHRYAIDEQQALRVETTAQLLFQQACGPW HHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC ALDADDARVLCWAARLHELGLVIAHSHYHVHGSYVLEHSDIAGFSRQEQQVLAVLVCTHR CCCCCCCHHHHHHHHHHHCCEEEEECEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHH RHVSKNAFDVLPDRLRVSVRRRAALLRLAALLHRAREPDWVPTLNLHVDGDVLMLTVPKG HHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCH CLASRPLLHSDLNAEVEAMVDLGIVFKLSVV HHHCCCCHHCCCCCHHHHHHHHCEEEEEECC >Mature Secondary Structure PSMPNTLPSYPPLKDGDLLAAIDLGSNSFHMVVARYLLGQLHVVDRLREAVRIADGLDA CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KGGLSSKACERALECLARFGQRLRNMPSPHVRALATNTVRRLRSPQAFLVLAETALGHSI CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCEE EVVSGREEARLIYLGVAHAQPPRLDQHRLVIDIGGGSTEFIIGKGFEPLERESLQVGCIA EEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHCCEEEEEEH STRRFFPEGKLSKKRWNDALTEIGTEFQQFAAQYNALGWQEALGSSGTHKTIAKICTEMK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHH LAKGEITAEALPVLREELLKAKRIEDIHLPGLSAHRRPIIAGGILVLEAVFQTLGLEKLL HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHH VSKAAMREGILYDMLGRAGDNDPRDTSVAVLMHRYAIDEQQALRVETTAQLLFQQACGPW HHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC ALDADDARVLCWAARLHELGLVIAHSHYHVHGSYVLEHSDIAGFSRQEQQVLAVLVCTHR CCCCCCCHHHHHHHHHHHCCEEEEECEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHH RHVSKNAFDVLPDRLRVSVRRRAALLRLAALLHRAREPDWVPTLNLHVDGDVLMLTVPKG HHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCH CLASRPLLHSDLNAEVEAMVDLGIVFKLSVV HHHCCCCHHCCCCCHHHHHHHHCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]