| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682537
Identifier: 182682537
GI number: 182682537
Start: 2266649
End: 2267167
Strand: Direct
Name: 182682537
Synonym: XfasM23_2025
Alternate gene names: NA
Gene position: 2266649-2267167 (Clockwise)
Preceding gene: 182682536
Following gene: 182682538
Centisome position: 89.39
GC content: 49.13
Gene sequence:
>519_bases ATGATGAAACACCACCCTCCACACCGCAGTAACCGCAGTAACCGCAGTAACCGCAGTAACCGCAGTAGAGGATTACGCAG AGTGGCCTGCCATCTTTACCAGTCACACGGCACTTGCCTTGGGCCCTACCTTCGATTGGCTGCATCGCTGTGGAAGGCCA CAAATGGGAGACAAGTTAGACAACTGTTCCTAAAACGCCATCCATTAAGCCAAAACCGTTACCGCCATAGTGCGGAACAT ACTTACTCGGATGTAAGTAATACCTGGAATTTAAGCCTATTTGAAGACAATGCCGGTTATACAGCCGATCTCAAGGACAA CAAGGACACAGGAACTGTGTGGACAGCATTTTGGTCTACAAGTAGCAGATGGCAATGCAATCACTTATCACCTGTTCCAA TTCCCCCTCTTCTTATGCAACATGACGTGGTTACATCCACTTTGCTTCCCAAGCAAGAGGGAAACCATACTCCAACAATC AGGGTCCAGCGGTACCCTCCTCCCCCTCCGAACAATTGA
Upstream 100 bases:
>100_bases GGCATCAAAATTTATTTTTTGATTAAAGCACTTTTGCTTAGGTTTTTTGTCAAGTAGCCCTTGATGGGAAGGTATAAAGC GCACTACAGTCCTAAATAGT
Downstream 100 bases:
>100_bases GGCTCAAGTGCGCATTTTGGTCATCGAAGACAACAGCGATATCGCCGCCAATCTGGGCGATTACCTTGAAGAACGCGGCC ACGCCGTGGATTTTGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MMKHHPPHRSNRSNRSNRSNRSRGLRRVACHLYQSHGTCLGPYLRLAASLWKATNGRQVRQLFLKRHPLSQNRYRHSAEH TYSDVSNTWNLSLFEDNAGYTADLKDNKDTGTVWTAFWSTSSRWQCNHLSPVPIPPLLMQHDVVTSTLLPKQEGNHTPTI RVQRYPPPPPNN
Sequences:
>Translated_172_residues MMKHHPPHRSNRSNRSNRSNRSRGLRRVACHLYQSHGTCLGPYLRLAASLWKATNGRQVRQLFLKRHPLSQNRYRHSAEH TYSDVSNTWNLSLFEDNAGYTADLKDNKDTGTVWTAFWSTSSRWQCNHLSPVPIPPLLMQHDVVTSTLLPKQEGNHTPTI RVQRYPPPPPNN >Mature_172_residues MMKHHPPHRSNRSNRSNRSNRSRGLRRVACHLYQSHGTCLGPYLRLAASLWKATNGRQVRQLFLKRHPLSQNRYRHSAEH TYSDVSNTWNLSLFEDNAGYTADLKDNKDTGTVWTAFWSTSSRWQCNHLSPVPIPPLLMQHDVVTSTLLPKQEGNHTPTI RVQRYPPPPPNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19869; Mature: 19869
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKHHPPHRSNRSNRSNRSNRSRGLRRVACHLYQSHGTCLGPYLRLAASLWKATNGRQVR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH QLFLKRHPLSQNRYRHSAEHTYSDVSNTWNLSLFEDNAGYTADLKDNKDTGTVWTAFWST HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEECC SSRWQCNHLSPVPIPPLLMQHDVVTSTLLPKQEGNHTPTIRVQRYPPPPPNN CCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MMKHHPPHRSNRSNRSNRSNRSRGLRRVACHLYQSHGTCLGPYLRLAASLWKATNGRQVR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH QLFLKRHPLSQNRYRHSAEHTYSDVSNTWNLSLFEDNAGYTADLKDNKDTGTVWTAFWST HHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCCEEEEEEECC SSRWQCNHLSPVPIPPLLMQHDVVTSTLLPKQEGNHTPTIRVQRYPPPPPNN CCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA