Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682499
Identifier: 182682499
GI number: 182682499
Start: 2226180
End: 2226614
Strand: Reverse
Name: 182682499
Synonym: XfasM23_1986
Alternate gene names: NA
Gene position: 2226614-2226180 (Counterclockwise)
Preceding gene: 182682500
Following gene: 182682497
Centisome position: 87.81
GC content: 58.39
Gene sequence:
>435_bases ATGCTCTTGTCGCAGGGGGGTGAAGAGATTGCCCAGCTGGTGCCTCACCAAGGCAGGATGTGTTTTTGGGAGCAGGTTGT GGAGTGGGATACGACGCGCATTGTGCTGTGTAGTGACATGCACCGCGATGTGGTCCATCCACTGCGTTGTGATGGAGGGT TGCACGCGGTGCATTTGTGTGAGTATGGGGCGCAGGCGATGGCGGTACATGGCGGTTTGCTCGGACGCCAGATGGGTCGT CCAGTGCGGCAGGGGATGTTGGTGGCATTGCGTGGGGTGACGCTGCACGTGGAGAGGTTCGACGATTTGCCCCAGGCGCT GTATGGGGAGGCGGAAGTACTGATGCAGGGTGAGAATAGTCAACAGTACAGATTCCGTATCTTCCATGTGGATCAGTTGC TCGCCGAAGGGCGTGCGGTAGTGATGTTGGGCTGA
Upstream 100 bases:
>100_bases AGTGCGATTGGGAGTACGGTGGCTCTGGGTGTGCTGCTTAACTTTGTTCTTGCGTTGTTGATCTCGCGTGTTCCGGTGTT GGAGAGGATTGCTGGGAGTG
Downstream 100 bases:
>100_bases ATGCTTTTCAAGGTTGGTACTGACAAGGCGGGTTCGGCAGGTGGCATGCGTCAAGCGCAGGTACAACGGGGAGGTTCTGC GGTGACAAGGGCAGGGCATG
Product: xanthomonadin biosynthesis protein
Products: NA
Alternate protein names: Phosphotransferase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; XanthomoNADin Biosynthesis Protein; -Hydroxymyristoyl-Acyl-Carrier-Protein Dehydratase; 3-Oxoacyl-[Acyl-Carrier Protein] Reductase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase-Like
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLLSQGGEEIAQLVPHQGRMCFWEQVVEWDTTRIVLCSDMHRDVVHPLRCDGGLHAVHLCEYGAQAMAVHGGLLGRQMGR PVRQGMLVALRGVTLHVERFDDLPQALYGEAEVLMQGENSQQYRFRIFHVDQLLAEGRAVVMLG
Sequences:
>Translated_144_residues MLLSQGGEEIAQLVPHQGRMCFWEQVVEWDTTRIVLCSDMHRDVVHPLRCDGGLHAVHLCEYGAQAMAVHGGLLGRQMGR PVRQGMLVALRGVTLHVERFDDLPQALYGEAEVLMQGENSQQYRFRIFHVDQLLAEGRAVVMLG >Mature_144_residues MLLSQGGEEIAQLVPHQGRMCFWEQVVEWDTTRIVLCSDMHRDVVHPLRCDGGLHAVHLCEYGAQAMAVHGGLLGRQMGR PVRQGMLVALRGVTLHVERFDDLPQALYGEAEVLMQGENSQQYRFRIFHVDQLLAEGRAVVMLG
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16190; Mature: 16190
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSQGGEEIAQLVPHQGRMCFWEQVVEWDTTRIVLCSDMHRDVVHPLRCDGGLHAVHLC CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCEEHHH EYGAQAMAVHGGLLGRQMGRPVRQGMLVALRGVTLHVERFDDLPQALYGEAEVLMQGENS HHCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCEEEEHHHHCCHHHHHCCEEEEEECCCC QQYRFRIFHVDQLLAEGRAVVMLG CEEEEEEEEHHHHHHCCCEEEEEC >Mature Secondary Structure MLLSQGGEEIAQLVPHQGRMCFWEQVVEWDTTRIVLCSDMHRDVVHPLRCDGGLHAVHLC CCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCEEHHH EYGAQAMAVHGGLLGRQMGRPVRQGMLVALRGVTLHVERFDDLPQALYGEAEVLMQGENS HHCCHHHHHHHHHHHHHCCCHHHHHHEEECCCCEEEEHHHHCCHHHHHCCEEEEEECCCC QQYRFRIFHVDQLLAEGRAVVMLG CEEEEEEEEHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA