Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682497
Identifier: 182682497
GI number: 182682497
Start: 2223672
End: 2223953
Strand: Reverse
Name: 182682497
Synonym: XfasM23_1984
Alternate gene names: NA
Gene position: 2223953-2223672 (Counterclockwise)
Preceding gene: 182682499
Following gene: 182682496
Centisome position: 87.71
GC content: 45.74
Gene sequence:
>282_bases GTGTATGTGGTTATTGTTCATAATTTGTTCTTGATGGAAAAATCTGAATCAGTAACACAATTAATGTCACATTTTTTACC TATGAATATTCAGCTTAATGGTCAATGTCGCTGCATCCCCGAGACAAGTTCAATTGCGGGTCTGCTTGCTGAGGAGGGGT TCAGTGAGCGTCGTGTTGCGGTGGAGGTTAACGGTGAGATTGTGCCACGCACTTTGCATGTGAATTACGTGCTGCGTGAG GGTGACCGTGTGGAGATTGTTCATGCGCTTGGTGGAGGCTGA
Upstream 100 bases:
>100_bases GGCAAAGGCGAGGAGGGAGCGTGTGAAATTGGAGGTCATGATGAGGGTGTTTTATTCAAAAATTGACGGTGGGTGCTGCA ACCAATGGGTATGTTGAGTA
Downstream 100 bases:
>100_bases AGTGTGTGAGTCGCGATGCGTAGAGAGGTAATGCGCCATAATCTCTGGATGAATAATTTCGCTTCCAATGATCCGCTTGT TATTGCTGGTACTGTTTACT
Product: sulfur carrier protein ThiS
Products: NA
Alternate protein names: Thiamine Biosynthesis Protein ThiS; Thiamin Biosynthesis ThiS; Sulfur Carrier Protein Involved In Thiamine Biosynthesis; Thiamine Biosynthesis Protein
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MYVVIVHNLFLMEKSESVTQLMSHFLPMNIQLNGQCRCIPETSSIAGLLAEEGFSERRVAVEVNGEIVPRTLHVNYVLRE GDRVEIVHALGGG
Sequences:
>Translated_93_residues MYVVIVHNLFLMEKSESVTQLMSHFLPMNIQLNGQCRCIPETSSIAGLLAEEGFSERRVAVEVNGEIVPRTLHVNYVLRE GDRVEIVHALGGG >Mature_93_residues MYVVIVHNLFLMEKSESVTQLMSHFLPMNIQLNGQCRCIPETSSIAGLLAEEGFSERRVAVEVNGEIVPRTLHVNYVLRE GDRVEIVHALGGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10350; Mature: 10350
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVVIVHNLFLMEKSESVTQLMSHFLPMNIQLNGQCRCIPETSSIAGLLAEEGFSERRVA CEEEEEEEEEEEECCCHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHCCCCCCEEE VEVNGEIVPRTLHVNYVLREGDRVEIVHALGGG EEECCEEEEEEEEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure MYVVIVHNLFLMEKSESVTQLMSHFLPMNIQLNGQCRCIPETSSIAGLLAEEGFSERRVA CEEEEEEEEEEEECCCHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHCCCCCCEEE VEVNGEIVPRTLHVNYVLREGDRVEIVHALGGG EEECCEEEEEEEEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA