Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is zur [H]
Identifier: 182682464
GI number: 182682464
Start: 2184080
End: 2184589
Strand: Direct
Name: zur [H]
Synonym: XfasM23_1951
Alternate gene names: 182682464
Gene position: 2184080-2184589 (Clockwise)
Preceding gene: 182682463
Following gene: 182682466
Centisome position: 86.13
GC content: 54.12
Gene sequence:
>510_bases ATGAGTAACGATCACGGCTGCACCGCCCCCCATCACCACGTACACGACGCACCCGAGTTCATCCATGCAGTGGAGCACGC ATGTAGCGAACGTGGACTACGCCTGACACCTATCCGCGCCAACGTATTGCAACTGATTGCTCACGCTGGCAAACCAGTGA AGGCATATGAACTGCTGGAATGGGTACGCGAGGGTAAGGATGTCGGCGCCGATGCTCCACCCACGGTCTACCGTGCGCTG GATTTTCTGATGACCCATGGTTTCATTCACAAACTAGAATCGATCAACGCCTTTATTGCGTGCCACCATCCAAACAGCAG AAAGCATTCAGCGCCCTTCCTCATCTGCGATAACTGCCATAACGCCGTGGAATTAGAAGACAAGGATGTCGTTGCCCAAT TGAATGCCTGTGCCAGAGCACTGGGCTTTCAACCGCAGATGCAAACGTTGGAAGTCCATGGGATATGCGCCAAGTGCGCC GCACAACACGACCCAACCGCCACTGTTTAA
Upstream 100 bases:
>100_bases ATTGCCTATACCGTTTACCTCACCGGCCGCAACGAAGCCTTGAAACGCATTGATGCGGCACTGATAAAAATCTCTACGGC TTGAATCCCACGGAATCTCT
Downstream 100 bases:
>100_bases AACACTGTACGAGTCTGTGAAACTCCCATTCATCATTAGCAGCAGCGCACACCCTGCAAACCGCACCTCCAAGAATCACC TCCAGACATAGAACACCTGT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSNDHGCTAPHHHVHDAPEFIHAVEHACSERGLRLTPIRANVLQLIAHAGKPVKAYELLEWVREGKDVGADAPPTVYRAL DFLMTHGFIHKLESINAFIACHHPNSRKHSAPFLICDNCHNAVELEDKDVVAQLNACARALGFQPQMQTLEVHGICAKCA AQHDPTATV
Sequences:
>Translated_169_residues MSNDHGCTAPHHHVHDAPEFIHAVEHACSERGLRLTPIRANVLQLIAHAGKPVKAYELLEWVREGKDVGADAPPTVYRAL DFLMTHGFIHKLESINAFIACHHPNSRKHSAPFLICDNCHNAVELEDKDVVAQLNACARALGFQPQMQTLEVHGICAKCA AQHDPTATV >Mature_168_residues SNDHGCTAPHHHVHDAPEFIHAVEHACSERGLRLTPIRANVLQLIAHAGKPVKAYELLEWVREGKDVGADAPPTVYRALD FLMTHGFIHKLESINAFIACHHPNSRKHSAPFLICDNCHNAVELEDKDVVAQLNACARALGFQPQMQTLEVHGICAKCAA QHDPTATV
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=141, Percent_Identity=38.2978723404255, Blast_Score=109, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18596; Mature: 18465
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDHGCTAPHHHVHDAPEFIHAVEHACSERGLRLTPIRANVLQLIAHAGKPVKAYELLE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCHHHHHHHH WVREGKDVGADAPPTVYRALDFLMTHGFIHKLESINAFIACHHPNSRKHSAPFLICDNCH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCC NAVELEDKDVVAQLNACARALGFQPQMQTLEVHGICAKCAAQHDPTATV CCEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNDHGCTAPHHHVHDAPEFIHAVEHACSERGLRLTPIRANVLQLIAHAGKPVKAYELLE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCHHHHHHHH WVREGKDVGADAPPTVYRALDFLMTHGFIHKLESINAFIACHHPNSRKHSAPFLICDNCH HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEECCCC NAVELEDKDVVAQLNACARALGFQPQMQTLEVHGICAKCAAQHDPTATV CCEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]