Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is engXCA [H]
Identifier: 182682466
GI number: 182682466
Start: 2186727
End: 2188571
Strand: Direct
Name: engXCA [H]
Synonym: XfasM23_1953
Alternate gene names: 182682466
Gene position: 2186727-2188571 (Clockwise)
Preceding gene: 182682464
Following gene: 182682468
Centisome position: 86.24
GC content: 56.91
Gene sequence:
>1845_bases ATGTCGTTTTCCAAACACTTCGGCAAACTCATGTTGGCCACGTGCCTATCCTTATCTGCGGCACCAGCATTCAGTTACAG CATCAGTCACGGGAAGGTCGTCGATGACAAAGGCAACCAAATCCAATTAAGGGGCGTCAACTGGTTTGGTTTTGAAACCG GAGATCATGTGGTAAATGGACTATGGGCACGTAATTGGAAAGAATTCATCACACAGCTACAGGGCATGGGATTCAACGCG ATACGTTTACCGTTCTGCCCAGCCAATCTAAATAGCAACACATCACCAAGCAGCATTGATTACAGCCGCAATCCGGACTT GCAAGGCTTGAGCTCGCTGCAAATCCTGGACAAGGTCGTCAAAGAATTGAGCGACCGCAGAATGTATGTGCTGCTAGATC ACCATCGGCCGGACTGCTCAGCAATCTCTGAGTTGTGGTACACGGATTCATACAGCGAAAAACAGTGGATTGATGATCTA CGCTTCGTCGCACACCGTTACGCCAACGTACACGGCGTCATCGGCTTGGAGGTAAAGAATGAACCACATGGCAGAACCAC CTGGGGCACCGGAGATCCAAAAACTGATTGGAACACCGCAGTCGAGCATGCGGCAGCAGCGATCTTGGAGGCCGCACCAA AATGGCTGATCGGAGTCGAGGGGATTGGAGAGAATCCCATCTGCTCCAGCACCATTGGGCATTTTTGGGGCGAAAACCTG GAACCGATGGACTGTACGCCACTGAAAGTCCCTGCCGACCATTTGCTATTGATGCCACACGTCTACGGGCCAGATGTCTA CGTACAGCCGTACTTCAATAGTCCGGATTTCCCAAACAACATGGCAGCGATCTGGGATAAACACTTCGGACATTTTGCGA AAGCCGGCTACGCGATGGCGATTGGTGAGTTCGGTGGCAAGTACGGTGAAGGTGATCCACGCGATATCGCTTGGCAAAAC GCTTTCGTGGATTACCTCATCAGTATCGGCGTGACGGATGCCTTCTATTGGGCAGCAAACCAGAACAGCGTCGATACCGG CGGCATGGTTGGCAATGACTGGACCACCCCACGCGATGACAAGGTGAAGCTGCTGAATAAGCTGTGGAATGCCGGTGGTG GTGCCAGTGGTGGTTCCGGCGGCGGTGCTGGTGCTAGTTCCGGCAGTGGTGCTGGCGGCGGCTCCAGCGGCGGTGCTGGT ACTGGTTCCGGCAGTGGTGCTGGCGGCGGCTCCAGCGGCGGTGCTGGTACTGGTTCCGGCAGTGGTGCTGGCGGCGGCTC CAGCGGCGGTGCTGGTGCTAGTTCCGGCAGTGGTGCTGGTGGCGGCTCCAGCGGCGGTGCTGGTACTGGTTCCGGCAGTG GTGCTGGCGGCGGCTCCAGCGGCGGTGCTGGTGCTAGTTCCGGCAGTGGTGCTGGCGGCGGCTCCAGCGGCGGTGCTGGT GCTAGTTCCGGCAGTGGTGCTGGCGGCGGCTCCAGCGGCGGTGCTGGTGCTGGTTCCGGCAGTGGTGCTCGCGGCGGCTC CAGCGGCGGTGCTGGTGCTGGTTCCGGCAGTGGTGCTGGCGGCGGCTCCGGTAGCGGCTCCGATCCTACAAAGAGCAAGA TTGCTGTTAATACCATCGTAGACAGCGATTGGCATACTGGTTACTGCGAGCGGATCCAAGTGACGAATACCAGCGACAGT CCGAATACCTGGACGGTGACGATTCCAATCAAGGGGAAGATCCAGACGCTATGGAGCGCGCGTTGGTCAGTGAAGGATAA CGCACTCACCGCTTTTGGTATGGACTGGAATAAGACGCTTGATCCGAAAGGCAGGACTGAATTCGGGTTCTGTTCGAACT ATTGA
Upstream 100 bases:
>100_bases GGCTTTAACCCTAACGGCGTTTGAATCACTAACGGCCACCATATCGACGACGGAGGATGAGTGCGCAGAAGATAACGGCC CTCCCTATTAAGGATACTTA
Downstream 100 bases:
>100_bases AGTGCATTTTCTATTCCGGCGGCAGACCGCCGCCGGAGTGGTAACGATGGCATGACAGCATCTCCCAAAAACAATCATTA GGCCTGTGCAACCACGCCGA
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MSFSKHFGKLMLATCLSLSAAPAFSYSISHGKVVDDKGNQIQLRGVNWFGFETGDHVVNGLWARNWKEFITQLQGMGFNA IRLPFCPANLNSNTSPSSIDYSRNPDLQGLSSLQILDKVVKELSDRRMYVLLDHHRPDCSAISELWYTDSYSEKQWIDDL RFVAHRYANVHGVIGLEVKNEPHGRTTWGTGDPKTDWNTAVEHAAAAILEAAPKWLIGVEGIGENPICSSTIGHFWGENL EPMDCTPLKVPADHLLLMPHVYGPDVYVQPYFNSPDFPNNMAAIWDKHFGHFAKAGYAMAIGEFGGKYGEGDPRDIAWQN AFVDYLISIGVTDAFYWAANQNSVDTGGMVGNDWTTPRDDKVKLLNKLWNAGGGASGGSGGGAGASSGSGAGGGSSGGAG TGSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAG ASSGSGAGGGSSGGAGAGSGSGARGGSSGGAGAGSGSGAGGGSGSGSDPTKSKIAVNTIVDSDWHTGYCERIQVTNTSDS PNTWTVTIPIKGKIQTLWSARWSVKDNALTAFGMDWNKTLDPKGRTEFGFCSNY
Sequences:
>Translated_614_residues MSFSKHFGKLMLATCLSLSAAPAFSYSISHGKVVDDKGNQIQLRGVNWFGFETGDHVVNGLWARNWKEFITQLQGMGFNA IRLPFCPANLNSNTSPSSIDYSRNPDLQGLSSLQILDKVVKELSDRRMYVLLDHHRPDCSAISELWYTDSYSEKQWIDDL RFVAHRYANVHGVIGLEVKNEPHGRTTWGTGDPKTDWNTAVEHAAAAILEAAPKWLIGVEGIGENPICSSTIGHFWGENL EPMDCTPLKVPADHLLLMPHVYGPDVYVQPYFNSPDFPNNMAAIWDKHFGHFAKAGYAMAIGEFGGKYGEGDPRDIAWQN AFVDYLISIGVTDAFYWAANQNSVDTGGMVGNDWTTPRDDKVKLLNKLWNAGGGASGGSGGGAGASSGSGAGGGSSGGAG TGSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAG ASSGSGAGGGSSGGAGAGSGSGARGGSSGGAGAGSGSGAGGGSGSGSDPTKSKIAVNTIVDSDWHTGYCERIQVTNTSDS PNTWTVTIPIKGKIQTLWSARWSVKDNALTAFGMDWNKTLDPKGRTEFGFCSNY >Mature_613_residues SFSKHFGKLMLATCLSLSAAPAFSYSISHGKVVDDKGNQIQLRGVNWFGFETGDHVVNGLWARNWKEFITQLQGMGFNAI RLPFCPANLNSNTSPSSIDYSRNPDLQGLSSLQILDKVVKELSDRRMYVLLDHHRPDCSAISELWYTDSYSEKQWIDDLR FVAHRYANVHGVIGLEVKNEPHGRTTWGTGDPKTDWNTAVEHAAAAILEAAPKWLIGVEGIGENPICSSTIGHFWGENLE PMDCTPLKVPADHLLLMPHVYGPDVYVQPYFNSPDFPNNMAAIWDKHFGHFAKAGYAMAIGEFGGKYGEGDPRDIAWQNA FVDYLISIGVTDAFYWAANQNSVDTGGMVGNDWTTPRDDKVKLLNKLWNAGGGASGGSGGGAGASSGSGAGGGSSGGAGT GSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAGA SSGSGAGGGSSGGAGAGSGSGARGGSSGGAGAGSGSGAGGGSGSGSDPTKSKIAVNTIVDSDWHTGYCERIQVTNTSDSP NTWTVTIPIKGKIQTLWSARWSVKDNALTAFGMDWNKTLDPKGRTEFGFCSNY
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR001919 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00553 CBM_2; PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 62041; Mature: 61910
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSKHFGKLMLATCLSLSAAPAFSYSISHGKVVDDKGNQIQLRGVNWFGFETGDHVVNG CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCEEEEEECEEECCCCHHHHHHH LWARNWKEFITQLQGMGFNAIRLPFCPANLNSNTSPSSIDYSRNPDLQGLSSLQILDKVV HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KELSDRRMYVLLDHHRPDCSAISELWYTDSYSEKQWIDDLRFVAHRYANVHGVIGLEVKN HHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC EPHGRTTWGTGDPKTDWNTAVEHAAAAILEAAPKWLIGVEGIGENPICSSTIGHFWGENL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCC EPMDCTPLKVPADHLLLMPHVYGPDVYVQPYFNSPDFPNNMAAIWDKHFGHFAKAGYAMA CCCCCCCCCCCCCCEEEECEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEE IGEFGGKYGEGDPRDIAWQNAFVDYLISIGVTDAFYWAANQNSVDTGGMVGNDWTTPRDD EHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH KVKLLNKLWNAGGGASGGSGGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGTGSG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGAGGGSSGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASSGSGAGGGSSGGAGAGSGSGARGGSSGGAGAGSGSGAGGGSGSGSDPTKSKIAVNTIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE DSDWHTGYCERIQVTNTSDSPNTWTVTIPIKGKIQTLWSARWSVKDNALTAFGMDWNKTL CCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEHHHCCCCCCCCCEEEECCCCCCCC DPKGRTEFGFCSNY CCCCCCCCCCCCCC >Mature Secondary Structure SFSKHFGKLMLATCLSLSAAPAFSYSISHGKVVDDKGNQIQLRGVNWFGFETGDHVVNG CCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCCCCEEEEEECEEECCCCHHHHHHH LWARNWKEFITQLQGMGFNAIRLPFCPANLNSNTSPSSIDYSRNPDLQGLSSLQILDKVV HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH KELSDRRMYVLLDHHRPDCSAISELWYTDSYSEKQWIDDLRFVAHRYANVHGVIGLEVKN HHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECC EPHGRTTWGTGDPKTDWNTAVEHAAAAILEAAPKWLIGVEGIGENPICSSTIGHFWGENL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCC EPMDCTPLKVPADHLLLMPHVYGPDVYVQPYFNSPDFPNNMAAIWDKHFGHFAKAGYAMA CCCCCCCCCCCCCCEEEECEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEE IGEFGGKYGEGDPRDIAWQNAFVDYLISIGVTDAFYWAANQNSVDTGGMVGNDWTTPRDD EHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH KVKLLNKLWNAGGGASGGSGGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGTGSG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGAGGGSSGGAGASSGSGAGGGSSGGAGTGSGSGAGGGSSGGAGASSGSGAGGGSSGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASSGSGAGGGSSGGAGAGSGSGARGGSSGGAGAGSGSGAGGGSGSGSDPTKSKIAVNTIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE DSDWHTGYCERIQVTNTSDSPNTWTVTIPIKGKIQTLWSARWSVKDNALTAFGMDWNKTL CCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCEEHHHCCCCCCCCCEEEECCCCCCCC DPKGRTEFGFCSNY CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2373365; 12024217 [H]