Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682457
Identifier: 182682457
GI number: 182682457
Start: 2174873
End: 2175448
Strand: Reverse
Name: 182682457
Synonym: XfasM23_1944
Alternate gene names: NA
Gene position: 2175448-2174873 (Counterclockwise)
Preceding gene: 182682459
Following gene: 182682453
Centisome position: 85.79
GC content: 49.65
Gene sequence:
>576_bases ATGAACACAACACATACCGATGATACAAAACGTTCCGTGTCTGGAAGGCCAGCAGCACAATTAAAAGATATTGCAGCTCA ACTGATCGTCATGGGGGAACAGGATCAGGTTGACCGCAAACGCGCCATGTCGCCTGGATTTGATGATTATGCATTGTATG CAGCCGATCTTAAGCGACAGCAACAGTTAGAACGGCTGATGCAAGGGCGCGGATTATTCAGGCTCAATGAGGTGGGCAAG GACGCTGTCACCGCCGAGTTTCTGATCATCCAGCACTCCAGTCCAGCGTTCATGAAGCGCTTTGAGAAAGAAATGGGAGA ACTTGCCGCCAGGGGTGATTTCCCCAAGGATGACTACGCAACATTCGTAGACCGCCTCTTGGTCTATGAACACAAACCAC AGCGCTACGGGACACAGGCAAACGGAGACTTGGAGTTGTACCCGATTGAAGACGAGCAGTTTGTAGATAAGCGGCGTGCG TCAATGGGATTGCCCCCATTACAGGTGCTCATTGATAAACTTGAGAAAGTCAAACAGTCTGTACGTAATGGAAAGGGACT CGGACTTGAGAAATAG
Upstream 100 bases:
>100_bases TCCAACGCAATGATATGTGGGTAGAGAAATGATCCATGCAATCACCAGGGGGGCACTGTTCGCTGCCCTGATGTTAGCTA CACATGCTTCAGGTGTGCCA
Downstream 100 bases:
>100_bases CGAACTGTTTACAGCAGTTTCTTAACAAAAGCATCCATATTCCAATGACACCTCATCGGCTTGGCAGACGTTTTGTCGCC GAGCTAATTGAAGTATTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNTTHTDDTKRSVSGRPAAQLKDIAAQLIVMGEQDQVDRKRAMSPGFDDYALYAADLKRQQQLERLMQGRGLFRLNEVGK DAVTAEFLIIQHSSPAFMKRFEKEMGELAARGDFPKDDYATFVDRLLVYEHKPQRYGTQANGDLELYPIEDEQFVDKRRA SMGLPPLQVLIDKLEKVKQSVRNGKGLGLEK
Sequences:
>Translated_191_residues MNTTHTDDTKRSVSGRPAAQLKDIAAQLIVMGEQDQVDRKRAMSPGFDDYALYAADLKRQQQLERLMQGRGLFRLNEVGK DAVTAEFLIIQHSSPAFMKRFEKEMGELAARGDFPKDDYATFVDRLLVYEHKPQRYGTQANGDLELYPIEDEQFVDKRRA SMGLPPLQVLIDKLEKVKQSVRNGKGLGLEK >Mature_191_residues MNTTHTDDTKRSVSGRPAAQLKDIAAQLIVMGEQDQVDRKRAMSPGFDDYALYAADLKRQQQLERLMQGRGLFRLNEVGK DAVTAEFLIIQHSSPAFMKRFEKEMGELAARGDFPKDDYATFVDRLLVYEHKPQRYGTQANGDLELYPIEDEQFVDKRRA SMGLPPLQVLIDKLEKVKQSVRNGKGLGLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21718; Mature: 21718
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTHTDDTKRSVSGRPAAQLKDIAAQLIVMGEQDQVDRKRAMSPGFDDYALYAADLKRQ CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH QQLERLMQGRGLFRLNEVGKDAVTAEFLIIQHSSPAFMKRFEKEMGELAARGDFPKDDYA HHHHHHHHCCCCEEHHHHCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHH TFVDRLLVYEHKPQRYGTQANGDLELYPIEDEQFVDKRRASMGLPPLQVLIDKLEKVKQS HHHHHHHHHCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VRNGKGLGLEK HHCCCCCCCCC >Mature Secondary Structure MNTTHTDDTKRSVSGRPAAQLKDIAAQLIVMGEQDQVDRKRAMSPGFDDYALYAADLKRQ CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH QQLERLMQGRGLFRLNEVGKDAVTAEFLIIQHSSPAFMKRFEKEMGELAARGDFPKDDYA HHHHHHHHCCCCEEHHHHCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHH TFVDRLLVYEHKPQRYGTQANGDLELYPIEDEQFVDKRRASMGLPPLQVLIDKLEKVKQS HHHHHHHHHCCCCHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VRNGKGLGLEK HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA