Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682459
Identifier: 182682459
GI number: 182682459
Start: 2177140
End: 2178144
Strand: Reverse
Name: 182682459
Synonym: XfasM23_1946
Alternate gene names: NA
Gene position: 2178144-2177140 (Counterclockwise)
Preceding gene: 182682460
Following gene: 182682457
Centisome position: 85.9
GC content: 52.54
Gene sequence:
>1005_bases ATGAGTATTGAACAGCTTGCAGAAACCGCTCAAGCAATGGTCGCCTCGGGTAAGGGGATCATTGCGATTGATGAGTCCGC CGGCACCATTGCTAAGCGTTTTTCCAGTGTCGGTATCGAAAATATTGAAGAGAATCGCCGTGCTTACCGTGAGTTGCTGC TGACGACCCCTAAATTGAGTGATTACATTTCTGGGGCGATTCTATTTGACGAGACCATTCGTCAATCCACGAAGGCCGGT GTCCCGTTTCCGAAGTACATGGCCGAGCATGGCATCATCCCAGGGATTAAAGTGGATAAGGGCGCATATCCGTTAGCAGG GTGTCCTGGTGAGTTGGTCACGGAGGGGTTGGATGGGTTGCGTGCACGACTGGAGGAGTATTACAAGCTTGGCGCACGTT TTGCCAAGTGGCGTGCTGTTATCAACATTGGTGATGATATTCCGTCAGGGATGTGCATTGATGCCAATGTACACGCGCTA GCGCGTTATGCGGCGTTGTGTCAGGAGCAGGGCTTGGTGCCGATGGTGGAGCCGGAGGTCATTATGGATGGTAACCATGA CATCTCGGCTGCTTATGAAGTGACCGAGGCGACGTTGCGTTCCCTGTTCAATGCGCTGTATGAGCAGAATGTGGTGCTTG AAGGAACCATTCTGAAGGCGTCTATGGTGATCCCTGGTACCGACTGTGAGGAGCAGGCCAGTATTGATGAAGTGGCTGAA TCCACGGTGATGTGTTTGAAATCGACAGTGCCTGCGATCCTGCCGGGTATTGTGTTCTTATCTGGTGGACAGACGGATGC GCAGTCCACGGCACATTTGAATGCGATGAATCAATTTGATCCCTTGCCGTGGCCGTTGAGTTTCTCTTATGGCCGTGCGA TGCAGCAGGCGGCATTGAAGTTGTGGTCACAGGATATGAAGGGCAATTTCGCCAAAGCGCAGCAGGTTGTGTACGAGCGG GCCAAGGAAAATGGTCTGGCCGCTCTTGGTAAGTGGAAGGGGTGA
Upstream 100 bases:
>100_bases AAGAAGGAGTGATTGCGTGTGTCTATTTATTTGAAAGGGAATGTTCTTGGGGTGTTCATCGCTATACTTCCGTTTTCTCC GTAGCTGCCATAGGAATCCA
Downstream 100 bases:
>100_bases GCTTCTTTGCTCATTGTGGCGAAGGCGCTGGCTGTGATGCTGGTGCCTTCTATGTTTGATGCTTCAAGTCGTACTGTGGC GGTTTTGGGAACGATGCGTA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSIEQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAG VPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHAL ARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAE STVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYER AKENGLAALGKWKG
Sequences:
>Translated_334_residues MSIEQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAG VPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHAL ARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAE STVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYER AKENGLAALGKWKG >Mature_333_residues SIEQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGV PFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALA RYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAES TVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERA KENGLAALGKWKG
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=331, Percent_Identity=49.2447129909366, Blast_Score=322, Evalue=2e-88, Organism=Homo sapiens, GI34577110, Length=331, Percent_Identity=49.2447129909366, Blast_Score=322, Evalue=2e-88, Organism=Homo sapiens, GI4557305, Length=331, Percent_Identity=49.2447129909366, Blast_Score=322, Evalue=2e-88, Organism=Homo sapiens, GI193794814, Length=331, Percent_Identity=49.2447129909366, Blast_Score=322, Evalue=2e-88, Organism=Homo sapiens, GI4885063, Length=333, Percent_Identity=47.4474474474475, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI40354205, Length=331, Percent_Identity=46.8277945619335, Blast_Score=301, Evalue=8e-82, Organism=Caenorhabditis elegans, GI71983985, Length=330, Percent_Identity=48.7878787878788, Blast_Score=320, Evalue=6e-88, Organism=Caenorhabditis elegans, GI25150450, Length=334, Percent_Identity=48.2035928143713, Blast_Score=311, Evalue=4e-85, Organism=Caenorhabditis elegans, GI71983990, Length=231, Percent_Identity=49.7835497835498, Blast_Score=235, Evalue=3e-62, Organism=Drosophila melanogaster, GI24650282, Length=332, Percent_Identity=49.3975903614458, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI24650280, Length=332, Percent_Identity=49.3975903614458, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI24650278, Length=332, Percent_Identity=49.3975903614458, Blast_Score=316, Evalue=2e-86, Organism=Drosophila melanogaster, GI221459619, Length=332, Percent_Identity=49.0963855421687, Blast_Score=315, Evalue=4e-86, Organism=Drosophila melanogaster, GI24650288, Length=332, Percent_Identity=49.0963855421687, Blast_Score=315, Evalue=4e-86, Organism=Drosophila melanogaster, GI45553577, Length=330, Percent_Identity=48.7878787878788, Blast_Score=308, Evalue=2e-84, Organism=Drosophila melanogaster, GI24650304, Length=332, Percent_Identity=42.1686746987952, Blast_Score=285, Evalue=3e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 36180; Mature: 36049
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLS CCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHH DYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGL HHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH RARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEV HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCE IMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAE EECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHHCCHHHHHH STVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALK HHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIEQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLS CHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHH DYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGL HHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH RARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEV HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCE IMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAE EECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCHHHCCHHHHHH STVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFDPLPWPLSFSYGRAMQQAALK HHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]