Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is surE
Identifier: 182682432
GI number: 182682432
Start: 2137414
End: 2138202
Strand: Direct
Name: surE
Synonym: XfasM23_1918
Alternate gene names: 182682432
Gene position: 2137414-2138202 (Clockwise)
Preceding gene: 182682430
Following gene: 182682433
Centisome position: 84.29
GC content: 57.29
Gene sequence:
>789_bases ATGCGCGTTCTTGTCAGTAACGACGACGGTGTCGACGCTCCCGGCATCAAGATTTTGGCGGACGCACTACGCAATGCCGG ACACGAAGTGATGGTTGTTGCCCCGGATCGGGACCGTTCCGGCGCCAGCAACTCACTTACATTGGACACACCGATCAGAG CCAAACAAATCGACATGCATACTTACAGTGTCGCCGGCACACCCACCGACTGCGTGCATCTGGCACTCACCGGCCTGCTG AACTACGACCCAGACATCGTCGTCTCCGGAATCAACAACACCGGCAACCTCGGAGACGACGTGATTTATTCCGGGACAGT ATCGGCAGCCATGGAAGGACGCTTCCTCGGACTCCCTGCAGTCGCCGTATCGTTGGTCACTCTCTGCCGCGAAGGACAGC AAGCACCTCAATATGAAACCGCCGCACACGCAGCAATAAATATTGTGGCGCAACTAAAAACCGACCCGCTCCCAGCCGAT ACCATCCTCAACGTCAACGTGCCAGATGTGACTTGGCAACAGATGCGCGGCTTCAAAGTCACCCGGCTTGGCAATCGTCA CCGCTCCGCCCCCTGTCTCACCCAAACCGATCCGCGCGGACATACCATCTATTGGATTGGCCCCGCAGGTCCTGAACAGG ACGCCGGCCCAGGAACTGACTTCGACGCAGTACGTAACACATACATCTCCATTACCCCGATTCACGTCGATCTGACCCGT TACCAAGCCCTGGAAAATGTCACCCGATGGACGGACAGACTCACCGCACACATGGACTGGCCCACATGA
Upstream 100 bases:
>100_bases CATGCCAAACACGCAAGATCACTGGATCATCGTGTTGGCCCCTCAATTTGTTACACGATACGATCATGTAATGGCATGAC ACTCACTCAAGAAAACACTA
Downstream 100 bases:
>100_bases CTGCACCTCCATCCCTGCAAGCGAAAGCCGTAGGGATCGGCATGACGTCGCAACGCGTCCGAGACCGCCTGGTCGAACGA CTACGCGAATGCGGCATCCA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MRVLVSNDDGVDAPGIKILADALRNAGHEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMHTYSVAGTPTDCVHLALTGLL NYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLCREGQQAPQYETAAHAAINIVAQLKTDPLPAD TILNVNVPDVTWQQMRGFKVTRLGNRHRSAPCLTQTDPRGHTIYWIGPAGPEQDAGPGTDFDAVRNTYISITPIHVDLTR YQALENVTRWTDRLTAHMDWPT
Sequences:
>Translated_262_residues MRVLVSNDDGVDAPGIKILADALRNAGHEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMHTYSVAGTPTDCVHLALTGLL NYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLCREGQQAPQYETAAHAAINIVAQLKTDPLPAD TILNVNVPDVTWQQMRGFKVTRLGNRHRSAPCLTQTDPRGHTIYWIGPAGPEQDAGPGTDFDAVRNTYISITPIHVDLTR YQALENVTRWTDRLTAHMDWPT >Mature_262_residues MRVLVSNDDGVDAPGIKILADALRNAGHEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMHTYSVAGTPTDCVHLALTGLL NYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTLCREGQQAPQYETAAHAAINIVAQLKTDPLPAD TILNVNVPDVTWQQMRGFKVTRLGNRHRSAPCLTQTDPRGHTIYWIGPAGPEQDAGPGTDFDAVRNTYISITPIHVDLTR YQALENVTRWTDRLTAHMDWPT
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=261, Percent_Identity=54.0229885057471, Blast_Score=259, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_XYLF2 (B2I8X7)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830592.1 - ProteinModelPortal: B2I8X7 - SMR: B2I8X7 - GeneID: 6203968 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1918 - HOGENOM: HBG600532 - OMA: DCVKMGI - ProtClustDB: PRK00346 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 28331; Mature: 28331
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLVSNDDGVDAPGIKILADALRNAGHEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMH CEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCEEEEEEE TYSVAGTPTDCVHLALTGLLNYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPA EEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHCCEEECCHH VAVSLVTLCREGQQAPQYETAAHAAINIVAQLKTDPLPADTILNVNVPDVTWQQMRGFKV HHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEE TRLGNRHRSAPCLTQTDPRGHTIYWIGPAGPEQDAGPGTDFDAVRNTYISITPIHVDLTR EECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEEEEEHHH YQALENVTRWTDRLTAHMDWPT HHHHHHHHHHHHHHEEEECCCC >Mature Secondary Structure MRVLVSNDDGVDAPGIKILADALRNAGHEVMVVAPDRDRSGASNSLTLDTPIRAKQIDMH CEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCEEEEEEE TYSVAGTPTDCVHLALTGLLNYDPDIVVSGINNTGNLGDDVIYSGTVSAAMEGRFLGLPA EEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHCCEEECCHH VAVSLVTLCREGQQAPQYETAAHAAINIVAQLKTDPLPADTILNVNVPDVTWQQMRGFKV HHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCHHHHCCEEE TRLGNRHRSAPCLTQTDPRGHTIYWIGPAGPEQDAGPGTDFDAVRNTYISITPIHVDLTR EECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEEEEEHHH YQALENVTRWTDRLTAHMDWPT HHHHHHHHHHHHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA