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The map label for this gene is yebA [C]

Identifier: 182682430

GI number: 182682430

Start: 2134912

End: 2135784

Strand: Direct

Name: yebA [C]

Synonym: XfasM23_1916

Alternate gene names: 182682430

Gene position: 2134912-2135784 (Clockwise)

Preceding gene: 182682425

Following gene: 182682432

Centisome position: 84.19

GC content: 58.53

Gene sequence:

>873_bases
ATGCCATCACATCTGCTCCCTGTGTCTGCTGCGGTCCTGATCGCCATGATGCCCCCTCCCTCCACTGCCCAAGACCGACC
CGACTGGCGCACCACACTGTGGCCACGGACCGCCTCCCCCACCACCTCATGCATCACTGCCCCCAATTCCTGGCTGGATC
TACGCCGCGATGGGGATCGCTACACCGCCCAAGCAAGCAATCCACTCGCAGGACCGGCACAAGTCAGACTAATTGCAACC
GGATCAATCCCATTACATACAGCCCCCACACTCCCCATCACCGCCGTCCTGCCCCCAGGGCAGTGCATTGCACTAGCACA
ACTGTACCCGGGTAAAAACGGTCTGCACCAAGGCGTGGATATCCGCCTGGAGGTTGTTCCAGGAGATCCGTACGGATACG
CCGATGACAGCATCTACCGTGTGCCATTCGACATCACCCCCATTCGCATTGATCAGGGCTTTGGCGGCACATTCAGCCAC
CACGACGTTGCCAACTACTACGCGCTAGACTTTGCCCTCCCCAAGGGCACTCCCATCTTGGCCGCACGTGCAGGACGCAT
CATGGAAGTTCAAACAGGCTTTCAAGAAACAGCCACCAATGGTCACCACGTTGGGGGCGGCAACCTGATTCGCATCCTGC
ACGAAGACGGCAGCATGGCCATATACGCACACCTGTCTGCGGACGGCATCACCGTGCATCAGGGTGACCGCGTCGCCACC
GGACAATGCTTAGGATTGTCAGGCAATACCGGCTTCAGCACCGCTCCCCACTTACACTTTGCAATACAACTAAATCGCAA
TCTGCGCCTGGTATCCGTACCGTTCCGCATGGCAAGCCCTCTAGGAGAACTACGCTTGCCGCGGAAACAATGA

Upstream 100 bases:

>100_bases
TGTCAATCTCTCCATACGGATAGAGAGATATATTTTTATCTAATCAAAATTCAATGCCACTCATCACTCAAACCTTCTGC
ACCGACTCACACTCAACACC

Downstream 100 bases:

>100_bases
AACTCCACAACCACAGAACATGGGAACCCTTCCTGCAACAACACCCGCAAAAAACTACCGCCATATGTCGCTAAAACGAA
CATCAGCAACCGCAGAGGCA

Product: peptidase M23

Products: NA

Alternate protein names: Staphylolytic enzyme ALE-1 [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPSHLLPVSAAVLIAMMPPPSTAQDRPDWRTTLWPRTASPTTSCITAPNSWLDLRRDGDRYTAQASNPLAGPAQVRLIAT
GSIPLHTAPTLPITAVLPPGQCIALAQLYPGKNGLHQGVDIRLEVVPGDPYGYADDSIYRVPFDITPIRIDQGFGGTFSH
HDVANYYALDFALPKGTPILAARAGRIMEVQTGFQETATNGHHVGGGNLIRILHEDGSMAIYAHLSADGITVHQGDRVAT
GQCLGLSGNTGFSTAPHLHFAIQLNRNLRLVSVPFRMASPLGELRLPRKQ

Sequences:

>Translated_290_residues
MPSHLLPVSAAVLIAMMPPPSTAQDRPDWRTTLWPRTASPTTSCITAPNSWLDLRRDGDRYTAQASNPLAGPAQVRLIAT
GSIPLHTAPTLPITAVLPPGQCIALAQLYPGKNGLHQGVDIRLEVVPGDPYGYADDSIYRVPFDITPIRIDQGFGGTFSH
HDVANYYALDFALPKGTPILAARAGRIMEVQTGFQETATNGHHVGGGNLIRILHEDGSMAIYAHLSADGITVHQGDRVAT
GQCLGLSGNTGFSTAPHLHFAIQLNRNLRLVSVPFRMASPLGELRLPRKQ
>Mature_289_residues
PSHLLPVSAAVLIAMMPPPSTAQDRPDWRTTLWPRTASPTTSCITAPNSWLDLRRDGDRYTAQASNPLAGPAQVRLIATG
SIPLHTAPTLPITAVLPPGQCIALAQLYPGKNGLHQGVDIRLEVVPGDPYGYADDSIYRVPFDITPIRIDQGFGGTFSHH
DVANYYALDFALPKGTPILAARAGRIMEVQTGFQETATNGHHVGGGNLIRILHEDGSMAIYAHLSADGITVHQGDRVATG
QCLGLSGNTGFSTAPHLHFAIQLNRNLRLVSVPFRMASPLGELRLPRKQ

Specific function: Lyses staphylococcal cells by hydrolyzing the polyglycine interpeptide bridges of the peptidoglycan [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR003646
- InterPro:   IPR013667 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF08460 SH3_5 [H]

EC number: =3.4.24.75 [H]

Molecular weight: Translated: 31165; Mature: 31034

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHLLPVSAAVLIAMMPPPSTAQDRPDWRTTLWPRTASPTTSCITAPNSWLDLRRDGDR
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCEEEECCCCE
YTAQASNPLAGPAQVRLIATGSIPLHTAPTLPITAVLPPGQCIALAQLYPGKNGLHQGVD
EEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCE
IRLEVVPGDPYGYADDSIYRVPFDITPIRIDQGFGGTFSHHDVANYYALDFALPKGTPIL
EEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEE
AARAGRIMEVQTGFQETATNGHHVGGGNLIRILHEDGSMAIYAHLSADGITVHQGDRVAT
EECCCCEEEEECCHHHHCCCCEEECCCCEEEEEECCCCEEEEEEECCCCEEEECCCEEEC
GQCLGLSGNTGFSTAPHLHFAIQLNRNLRLVSVPFRMASPLGELRLPRKQ
CEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECHHHHCCHHHCCCCCCC
>Mature Secondary Structure 
PSHLLPVSAAVLIAMMPPPSTAQDRPDWRTTLWPRTASPTTSCITAPNSWLDLRRDGDR
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCEEEECCCCE
YTAQASNPLAGPAQVRLIATGSIPLHTAPTLPITAVLPPGQCIALAQLYPGKNGLHQGVD
EEEECCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCE
IRLEVVPGDPYGYADDSIYRVPFDITPIRIDQGFGGTFSHHDVANYYALDFALPKGTPIL
EEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEE
AARAGRIMEVQTGFQETATNGHHVGGGNLIRILHEDGSMAIYAHLSADGITVHQGDRVAT
EECCCCEEEEECCHHHHCCCCEEECCCCEEEEEECCCCEEEEEEECCCCEEEECCCEEEC
GQCLGLSGNTGFSTAPHLHFAIQLNRNLRLVSVPFRMASPLGELRLPRKQ
CEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9023202 [H]