Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682347
Identifier: 182682347
GI number: 182682347
Start: 2034736
End: 2034975
Strand: Direct
Name: 182682347
Synonym: XfasM23_1830
Alternate gene names: NA
Gene position: 2034736-2034975 (Clockwise)
Preceding gene: 182682346
Following gene: 182682348
Centisome position: 80.24
GC content: 50.42
Gene sequence:
>240_bases ATGAGCGCCCCATCAAATGAAAAGCATCAAGACACCCCACCACTCGAGTTATCCGATGAATGTGCGCGTATTCGCGAACA CATGTCCTTTATCGAAGCCTTGGTCACTAATATGGTCGCTGAAAAAGAGAAAGAAAAAGACGCGGAAGCGGAAAAACTCA AAGAGGGAACCCACCGAGAGGCCGCATTAGGGGAATTACAGGAGCGTAATACAGGAGGGCACGGGGATGAGCGCTGCTGA
Upstream 100 bases:
>100_bases CCCGCCGTGAATCTAAACGCGAAGTACAGGACCTGCTGCTGGAAGCGGTGAAACGCAGAGAAACAGGCAAACCACTCACA TCACAAGGAGCCATGACGCG
Downstream 100 bases:
>100_bases AAAACTTCCCGAGTTGTATACCGAAGAGGAAGCCGCACGCCGACTCCTCGTCAGCAAAGCCACACTCACCCGAGAACGCA TGGCTGGCCGGATACACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSAPSNEKHQDTPPLELSDECARIREHMSFIEALVTNMVAEKEKEKDAEAEKLKEGTHREAALGELQERNTGGHGDERC
Sequences:
>Translated_79_residues MSAPSNEKHQDTPPLELSDECARIREHMSFIEALVTNMVAEKEKEKDAEAEKLKEGTHREAALGELQERNTGGHGDERC >Mature_78_residues SAPSNEKHQDTPPLELSDECARIREHMSFIEALVTNMVAEKEKEKDAEAEKLKEGTHREAALGELQERNTGGHGDERC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8861; Mature: 8730
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPSNEKHQDTPPLELSDECARIREHMSFIEALVTNMVAEKEKEKDAEAEKLKEGTHRE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AALGELQERNTGGHGDERC HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SAPSNEKHQDTPPLELSDECARIREHMSFIEALVTNMVAEKEKEKDAEAEKLKEGTHRE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AALGELQERNTGGHGDERC HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA