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The map label for this gene is 182682346

Identifier: 182682346

GI number: 182682346

Start: 2033321

End: 2034739

Strand: Direct

Name: 182682346

Synonym: XfasM23_1829

Alternate gene names: NA

Gene position: 2033321-2034739 (Clockwise)

Preceding gene: 182682344

Following gene: 182682347

Centisome position: 80.19

GC content: 56.66

Gene sequence:

>1419_bases
ATGAACCTGCGCCCCTACCAACACACCATCGTTGATTTCATCCTGACGCACCCACGCTGCAATCTGTTTGTGCCCATGGG
TTTGGGGAAGACAGTAGCCACGCTGACGGCGTTAGATGTGCTTTTGGTGGTGGAAGACATTGCGCCTATTTTGGTGATTG
CTCCGCTGCGCGTTGCGGCCACGACATGGCCGGATGAGGTGGCCAAGTTCCCCCATTTGCGCCATCTGCGGGTGTCCGTG
GTCGTGGGTAGTGCGGCGGCACGTCGCCACGCCTTGGAGCAGGAGGCGGATATCTACTGCATTAATTACGACACTCTGAA
ATGGTTAGTGGAGTTTTACAAGGACCGTTGGCCGTTCCGTATGGTGGTCGCCGATGAGTGCTCCAAGTTGAAAGGGTTCC
GGCTGCGGCAAGGAACACGGCGCGCCCGCGCACTGGCCACGCATGTGCATACCAAGGTGGAGCGCTACGTTGGGTTGACC
GGCACGCCCGCGCCCAATGGGCTACAGGACCTGTGGGCGCTGATGTGGATGGTGGATCGTGGGGCACGGCTTGGGACGCA
TTTTAAAGCGTTTATCGATCGCTGGTTCCGTGCGATGCAGATCGGCAGTGATCCGCATGCGGTGCGCTTTGCGCCCACGC
CACATGCATCTCAAGAGATTCAAGACAAGATACGCGACCTGTGTTTATCACTTGATCCACAGGCGTACTTCGATTTATGC
CAGCCGATTGTCAATACGATTCGCGTTGCGTTGCCAGCACATGCGCAACGTCTGTACAAGGCGATGGAACAAGATATGTT
CATCGCCTTGGAATGCGGTGCTGAAGTAGAAGCCTTTAACGCCGCCAGCAAGACAATTAAATGCCTGCAACTGGCCAATG
GTGCGCTGTACACCGATGACACACGTCAGGCCTGGGAAGTCGTGCACGATGCGAAATTAGAGGCGCTGCACGACATTATC
GAAGAAGCCGCCGGTATGCCGGTGTTGGTGGCGTATCACTTTAAAAGTGATGTCGCACGGTTGCAGCGTGCCTTCCCCAA
GGGGCGTGCTTTGGACAAACACCCCGACACGATCCGCGATTGGAATGCGGGGAACATTCCCGTGCTATTTGCCCATCCGG
CCAGTGCCGGTCATGGCTTAAATCTGCAAGACGGCGGAAATATTTTGGCCTTCTTCGGCCACTGGTGGGACCTGGAGCAG
TACCAGCAGATCATCGAACGCATTGGGCCGACACGTCAGGCGCAAGCCGGACATCAGCGGCCTGTATTTATTCACCACAT
CGTGGCGGCGGGCACGGTGGATGAATTGGTGATGGCCCGCCGTGAATCTAAACGCGAAGTACAGGACCTGCTGCTGGAAG
CGGTGAAACGCAGAGAAACAGGCAAACCACTCACATCACAAGGAGCCATGACGCGATGA

Upstream 100 bases:

>100_bases
ACGCTACAGATGTCACACAGTCCCCCGCTTTAGCTCCATGTGGTGGCGAGTATAGCAGCGTGCCTCCCACCCATCCTGAA
GTGCTGCACGGAGCGTTGGC

Downstream 100 bases:

>100_bases
GCGCCCCATCAAATGAAAAGCATCAAGACACCCCACCACTCGAGTTATCCGATGAATGTGCGCGTATTCGCGAACACATG
TCCTTTATCGAAGCCTTGGT

Product: SNF2-like protein

Products: NA

Alternate protein names: SNF2 Domain Protein; SNF2/RAD54 Family Helicase; Helicase; SNF2 Domain-Containing Protein; SNF2-Like Protein; SNF2 Family DNA/RNA Helicase; Phage-Associated Helicase; Phage Related DNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Phage-Related DNA Helicase; Snf2 Family Helicase; Phage-Associated Helicase Snf2 Family; SNF2 Family Helicase; SNF2 Related Protein; SWI/SNF Chromatin-Remodeling Complex Subunit; Prophage; SNF2 Family Protein; SNF2/Helicase Domain Protein; Helicase Domain-Containing Protein; Phage-Associated Protein; Phage DNA Helicase Partial; APSE-2 Prophage; DNA/RNA Helicase Superfamily II SNF2 Family; SNF2

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAATTWPDEVAKFPHLRHLRVSV
VVGSAAARRHALEQEADIYCINYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVHTKVERYVGLT
GTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQIGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLC
QPIVNTIRVALPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEALHDII
EEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAMTR

Sequences:

>Translated_472_residues
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAATTWPDEVAKFPHLRHLRVSV
VVGSAAARRHALEQEADIYCINYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVHTKVERYVGLT
GTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQIGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLC
QPIVNTIRVALPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEALHDII
EEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAMTR
>Mature_472_residues
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAATTWPDEVAKFPHLRHLRVSV
VVGSAAARRHALEQEADIYCINYDTLKWLVEFYKDRWPFRMVVADECSKLKGFRLRQGTRRARALATHVHTKVERYVGLT
GTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAMQIGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLC
QPIVNTIRVALPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEALHDII
EEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAMTR

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53258; Mature: 53258

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAA
CCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
TTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQEADIYCINYDTLKWLVEFYKDRWPFR
CCCHHHHHHCCCHHHEEEEEEECHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCEE
MVVADECSKLKGFRLRQGTRRARALATHVHTKVERYVGLTGTPAPNGLQDLWALMWMVDR
EEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
GARLGTHFKAFIDRWFRAMQIGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLC
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
QPIVNTIRVALPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
HHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECC
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQR
CCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCC
PVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAMTR
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAA
CCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
TTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQEADIYCINYDTLKWLVEFYKDRWPFR
CCCHHHHHHCCCHHHEEEEEEECHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCEE
MVVADECSKLKGFRLRQGTRRARALATHVHTKVERYVGLTGTPAPNGLQDLWALMWMVDR
EEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC
GARLGTHFKAFIDRWFRAMQIGSDPHAVRFAPTPHASQEIQDKIRDLCLSLDPQAYFDLC
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
QPIVNTIRVALPAHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
HHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECC
TRQAWEVVHDAKLEALHDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRD
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQR
CCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCC
PVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAMTR
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA