Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682348
Identifier: 182682348
GI number: 182682348
Start: 2034962
End: 2035285
Strand: Direct
Name: 182682348
Synonym: XfasM23_1831
Alternate gene names: NA
Gene position: 2034962-2035285 (Clockwise)
Preceding gene: 182682347
Following gene: 182682350
Centisome position: 80.25
GC content: 52.47
Gene sequence:
>324_bases ATGAGCGCTGCTGAAAAACTTCCCGAGTTGTATACCGAAGAGGAAGCCGCACGCCGACTCCTCGTCAGCAAAGCCACACT CACCCGAGAACGCATGGCTGGCCGGATACACCCCATTCGTATCAGTACCCGGATTTACAGGTACAGCAATCAAATCATTG AGGAGTACATTCAACAATGCAGGAACGCCCAGGGCAAATTGGGAACTACTGGCTCAGCCAGCGCACAGGTTCCAAAAATT GGTGCCGCACTTGGTTTGACGCCGCTACCCGACAGACAAACCGCGCATCTCTTGGCACAACGGATATTCAAGAAGCCAAA GTAA
Upstream 100 bases:
>100_bases GAGAAAGAAAAAGACGCGGAAGCGGAAAAACTCAAAGAGGGAACCCACCGAGAGGCCGCATTAGGGGAATTACAGGAGCG TAATACAGGAGGGCACGGGG
Downstream 100 bases:
>100_bases GGTTATGGGAATGGTATGCCAAATATGGCGATATCAGCAAACAAATGCCCCAGGATGTCGTCCTGGACTTAGTCCTAACC AAGTATTGGCAGCAACATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSAAEKLPELYTEEEAARRLLVSKATLTRERMAGRIHPIRISTRIYRYSNQIIEEYIQQCRNAQGKLGTTGSASAQVPKI GAALGLTPLPDRQTAHLLAQRIFKKPK
Sequences:
>Translated_107_residues MSAAEKLPELYTEEEAARRLLVSKATLTRERMAGRIHPIRISTRIYRYSNQIIEEYIQQCRNAQGKLGTTGSASAQVPKI GAALGLTPLPDRQTAHLLAQRIFKKPK >Mature_106_residues SAAEKLPELYTEEEAARRLLVSKATLTRERMAGRIHPIRISTRIYRYSNQIIEEYIQQCRNAQGKLGTTGSASAQVPKIG AALGLTPLPDRQTAHLLAQRIFKKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11988; Mature: 11857
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAEKLPELYTEEEAARRLLVSKATLTRERMAGRIHPIRISTRIYRYSNQIIEEYIQQC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH RNAQGKLGTTGSASAQVPKIGAALGLTPLPDRQTAHLLAQRIFKKPK HCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SAAEKLPELYTEEEAARRLLVSKATLTRERMAGRIHPIRISTRIYRYSNQIIEEYIQQC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH RNAQGKLGTTGSASAQVPKIGAALGLTPLPDRQTAHLLAQRIFKKPK HCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA