Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682331
Identifier: 182682331
GI number: 182682331
Start: 2023580
End: 2023909
Strand: Direct
Name: 182682331
Synonym: XfasM23_1814
Alternate gene names: NA
Gene position: 2023580-2023909 (Clockwise)
Preceding gene: 182682330
Following gene: 182682332
Centisome position: 79.8
GC content: 51.52
Gene sequence:
>330_bases ATGATTGCCAGCATGGAAGCACGTATAGTTCAACTTGAAACTATCATCTCCATGCTTGCCACCAAGGCTGATGTTGAAAG TTTGCGGGCTGACTTAAACAAGTCGGCAGGTGAGTTGCGTGCTGATTTCGAGAAGGCTCAAAAAGAAAACCGGACATGGA TGCTTGCTACGGTCATCGCCCTTTTCGCAGGCATTCTTGGTGTTGGTGGCTTCGTGGTCAGCAGCATCAAGGGGAGCTAT CAAGCGTTACCGGCTCAGTCCGCTCCCATCATCATCCAACTTCCTGCTCAGGCATTGCAGCCACCGCCACAAGCGGCTAA GCAGCCTTAA
Upstream 100 bases:
>100_bases CATTAAAAACGGTATGAAGCATGGTGCTGCGGAAGGAAGCAAAAAATTCCGTATTTGACGCGGGAAAGTCCATCATTTGC GGGCGACTGCAATCTGTCCC
Downstream 100 bases:
>100_bases TCATCAATTGCCCTTGAAAACACAAACCCCGCTAGCGCGGGGTTTCTCATTATTTAGCTGAAAATTAGGCCCACCCTAAT TGTTCACCTATAAGCATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MIASMEARIVQLETIISMLATKADVESLRADLNKSAGELRADFEKAQKENRTWMLATVIALFAGILGVGGFVVSSIKGSY QALPAQSAPIIIQLPAQALQPPPQAAKQP
Sequences:
>Translated_109_residues MIASMEARIVQLETIISMLATKADVESLRADLNKSAGELRADFEKAQKENRTWMLATVIALFAGILGVGGFVVSSIKGSY QALPAQSAPIIIQLPAQALQPPPQAAKQP >Mature_109_residues MIASMEARIVQLETIISMLATKADVESLRADLNKSAGELRADFEKAQKENRTWMLATVIALFAGILGVGGFVVSSIKGSY QALPAQSAPIIIQLPAQALQPPPQAAKQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11603; Mature: 11603
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASMEARIVQLETIISMLATKADVESLRADLNKSAGELRADFEKAQKENRTWMLATVIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH LFAGILGVGGFVVSSIKGSYQALPAQSAPIIIQLPAQALQPPPQAAKQP HHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECHHHCCCCCCCCCCC >Mature Secondary Structure MIASMEARIVQLETIISMLATKADVESLRADLNKSAGELRADFEKAQKENRTWMLATVIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH LFAGILGVGGFVVSSIKGSYQALPAQSAPIIIQLPAQALQPPPQAAKQP HHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA