Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682332
Identifier: 182682332
GI number: 182682332
Start: 2024173
End: 2024706
Strand: Direct
Name: 182682332
Synonym: XfasM23_1815
Alternate gene names: NA
Gene position: 2024173-2024706 (Clockwise)
Preceding gene: 182682331
Following gene: 182682333
Centisome position: 79.83
GC content: 51.69
Gene sequence:
>534_bases ATGACATTAAACGTTAGCGAGCAAGCCCAGCCCCAGGCCCGCCCACCCGTATCAGAAACTAAAAAAGAGATTGCTGCTGC TTGGGCTGTATGCGAAGCCGCTAGAAAAGAAGTGCGTGATGCTTTATATGACTGCGAAGACGCTGCTAGGGACGCGTATG AGGCACGCGAAGCCGCTGAAGAAGGAGCGCGTGATGCTGCTTTTGCTTTATACGACGCTGATAAAAAACAAGAAGCGTTT GGTGCTGCTATGGCTGTTGCGCGTGCCGCTTGGGCCTCCTACGAAGCCGCCGAAGAAGAAGCGTTTGATGAGGTTCGTAG TGAATCCGGAGCGGCTATAACAGAATCACATGCTGCGTACATAGCCGCTAGAGAAAAAGCCAGTGCTGCCTTTGCGGCTT ACTACGCCGTTAAAGACGAAAAAGCGCGTGATACCAATATTGTTATTAATGCTATTCGTGATGCTTTTTATGCCGCCGAC CTTGCTGCATACGAAGCCACTGAAGCTGCCGCTAGTAACGGGGTGGCCGCATGA
Upstream 100 bases:
>100_bases TATTTAGCCTTTAGCTATTGACGTAAATTTAGCTTTAGGCTTAATACCCCCATCGCCCCACGACACCCGCAACCGGCGGC AGGGGCCAGGAGATACCGAA
Downstream 100 bases:
>100_bases CTGCCACGACCGCATCTGAAACTAAAAAAGCGCCGTTGTTTTATTGGAACGGCATTAAGGATGACGAAGACGCACCGCTA CAGGAAGCTTTTTACGCAAA
Product: mucin-associated surface protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAEEGARDAAFALYDADKKQEAF GAAMAVARAAWASYEAAEEEAFDEVRSESGAAITESHAAYIAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAAD LAAYEATEAAASNGVAA
Sequences:
>Translated_177_residues MTLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAEEGARDAAFALYDADKKQEAF GAAMAVARAAWASYEAAEEEAFDEVRSESGAAITESHAAYIAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAAD LAAYEATEAAASNGVAA >Mature_176_residues TLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAEEGARDAAFALYDADKKQEAFG AAMAVARAAWASYEAAEEEAFDEVRSESGAAITESHAAYIAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAADL AAYEATEAAASNGVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18861; Mature: 18729
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGARDAAFALYDADKKQEAFGAAMAVARAAWASYEAAEEEAFDEVRSESGAAITESHAAY HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH IAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAADLAAYEATEAAASNGVAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLNVSEQAQPQARPPVSETKKEIAAAWAVCEAARKEVRDALYDCEDAARDAYEAREAAE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGARDAAFALYDADKKQEAFGAAMAVARAAWASYEAAEEEAFDEVRSESGAAITESHAAY HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH IAAREKASAAFAAYYAVKDEKARDTNIVINAIRDAFYAADLAAYEATEAAASNGVAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA