Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is folB [H]
Identifier: 182682252
GI number: 182682252
Start: 1917456
End: 1917818
Strand: Reverse
Name: folB [H]
Synonym: XfasM23_1734
Alternate gene names: 182682252
Gene position: 1917818-1917456 (Counterclockwise)
Preceding gene: 182682253
Following gene: 182682251
Centisome position: 75.63
GC content: 47.93
Gene sequence:
>363_bases ATGGATAAAGTGTTTATCGAAGGTCTTGAGATCGACGCGTTGATCGGTATTTACGATTGGGAGCGACGAGTTCGTCAGAT ACTGTGTTTTGATCTTGAAATGGGTTTCGATAATCGTCTTCCGGCAGCCAGTGACGATATCGTTGATGCATTGAACTATA GTGCGATTAGTAAGCGTTTAATCGAAGTTGTGCAGCAATCTGACTGTGGTTTGGTTGAGACGTTGGCCGAGTATTGTGCG GCGGTATTGCTTGATGAATTCGGTATGCATTGGCTACGTTTGAAACTGAGTAAGCCGGGTGCGGTGCGTGGCGCCCAGGC AGTGGGCGTCATCATTGAGCGTCACCGTACCAATGCCGTTTAA
Upstream 100 bases:
>100_bases CGGTCGTGCCGCCGATGAGTCCCTAGTTTTATAGTTGTTTACCGCGTGAAAATGTTTTCTGCACTCTGGCTTGTTTCATC TCCCCTGAAAAAATTTTTCT
Downstream 100 bases:
>100_bases GCGTTGGGGGTGTTTGGGAGGGTGCTGTTTCTTGGATCAATTTACGTGACTTAAGTCGCTATTTATGGGTGATATTCTCG TCTCCTTGTGTTGGCTGCCA
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MDKVFIEGLEIDALIGIYDWERRVRQILCFDLEMGFDNRLPAASDDIVDALNYSAISKRLIEVVQQSDCGLVETLAEYCA AVLLDEFGMHWLRLKLSKPGAVRGAQAVGVIIERHRTNAV
Sequences:
>Translated_120_residues MDKVFIEGLEIDALIGIYDWERRVRQILCFDLEMGFDNRLPAASDDIVDALNYSAISKRLIEVVQQSDCGLVETLAEYCA AVLLDEFGMHWLRLKLSKPGAVRGAQAVGVIIERHRTNAV >Mature_120_residues MDKVFIEGLEIDALIGIYDWERRVRQILCFDLEMGFDNRLPAASDDIVDALNYSAISKRLIEVVQQSDCGLVETLAEYCA AVLLDEFGMHWLRLKLSKPGAVRGAQAVGVIIERHRTNAV
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=114, Percent_Identity=50.8771929824561, Blast_Score=115, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13480; Mature: 13480
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVFIEGLEIDALIGIYDWERRVRQILCFDLEMGFDNRLPAASDDIVDALNYSAISKRL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH IEVVQQSDCGLVETLAEYCAAVLLDEFGMHWLRLKLSKPGAVRGAQAVGVIIERHRTNAV HHHHHCCCCCHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MDKVFIEGLEIDALIGIYDWERRVRQILCFDLEMGFDNRLPAASDDIVDALNYSAISKRL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH IEVVQQSDCGLVETLAEYCAAVLLDEFGMHWLRLKLSKPGAVRGAQAVGVIIERHRTNAV HHHHHCCCCCHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]