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The map label for this gene is yafV [H]

Identifier: 182682080

GI number: 182682080

Start: 1732153

End: 1732962

Strand: Reverse

Name: yafV [H]

Synonym: XfasM23_1558

Alternate gene names: 182682080

Gene position: 1732962-1732153 (Counterclockwise)

Preceding gene: 182682081

Following gene: 182682079

Centisome position: 68.34

GC content: 53.7

Gene sequence:

>810_bases
ATGCAGGATTTGCGTATTTCTCTTGTTCAAGGTGAGACGCGGTGGCATGACGCAGCGGGTAATCGGCATTACTACGGTGC
GCTGTTGGCTCCTCTGGCGGGTGTCACGGATGTGGCGGTGTTGCCTGAGACGTTTACCAGTGGTTTTTCTAACGATGTCC
TTGAGGATGTGGAGGGGATGGATGGTCCGACGGTCGCTTGGGTTCTTGAGCAGGCGGCGTCTTTAGAGGCTGTGGTGACG
GGAAGTGTGCGGTTATGTACGCCTGAGGGGGTATTCAATCGGTTGTTATGGGCGACTCCAGAGGGACGGTTGGAGACGTA
CGATAAGCGGCATTTGTTTCGTTATGCGAACGAGCATCAGCGTTATGTCGCTGGGTGTAGGCGTTTGGTTGTGGAATGGA
AGGGCTGGAGAATCAATCCGCAGATTTGTTATGACTTGCGTTTCCCCGTGTTTTGCAGGAATCGCTATGACGTTGAGCGT
TCTGGCCAGCTTGATTTTGATGTGCAGCTTTTTGTTGCCAACTGGCCGTCGGTACGGGCTGAGGCTTGGAAAACGCTGTT
GCGGGCGCGTGCGATTGAGAATTTATGTTATGTCGTTGGGGTCAATCGGGTGGGGGTGGATGGTAATCAATTGCATTATG
TGGGGGATAGTGCGGTGATTGATGTCTTTGGTCAGGCTCAAGTGGAGATCCGCGGGCGTGAACAGGTGGTGACTACGGTC
ATTTCGGGGCAGGTGTTGGCAGAGCACCGCGCTCGTTTTCCGGCAATGCTGGATGCAGATGCTTTTGCGTTGGAAATGGG
CGGGTATTAA

Upstream 100 bases:

>100_bases
CCAGCGGGGCAGCGTTTGGTGCGGTTGTGTTTCGCTAAAAATGATATGACGTTGGGGGCGGCGATCGAGCGGTTACAACG
GCTTTGATGTGGAGGATGTG

Downstream 100 bases:

>100_bases
TCGGTGATTAGTTGCTGAATGGGCACTTGGGGGTATCTCATCTCCTAGGGGGATGGGCTGCTACAGTCAGCGCCATTGTT
CATTTGGAATACCGATCATG

Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MQDLRISLVQGETRWHDAAGNRHYYGALLAPLAGVTDVAVLPETFTSGFSNDVLEDVEGMDGPTVAWVLEQAASLEAVVT
GSVRLCTPEGVFNRLLWATPEGRLETYDKRHLFRYANEHQRYVAGCRRLVVEWKGWRINPQICYDLRFPVFCRNRYDVER
SGQLDFDVQLFVANWPSVRAEAWKTLLRARAIENLCYVVGVNRVGVDGNQLHYVGDSAVIDVFGQAQVEIRGREQVVTTV
ISGQVLAEHRARFPAMLDADAFALEMGGY

Sequences:

>Translated_269_residues
MQDLRISLVQGETRWHDAAGNRHYYGALLAPLAGVTDVAVLPETFTSGFSNDVLEDVEGMDGPTVAWVLEQAASLEAVVT
GSVRLCTPEGVFNRLLWATPEGRLETYDKRHLFRYANEHQRYVAGCRRLVVEWKGWRINPQICYDLRFPVFCRNRYDVER
SGQLDFDVQLFVANWPSVRAEAWKTLLRARAIENLCYVVGVNRVGVDGNQLHYVGDSAVIDVFGQAQVEIRGREQVVTTV
ISGQVLAEHRARFPAMLDADAFALEMGGY
>Mature_269_residues
MQDLRISLVQGETRWHDAAGNRHYYGALLAPLAGVTDVAVLPETFTSGFSNDVLEDVEGMDGPTVAWVLEQAASLEAVVT
GSVRLCTPEGVFNRLLWATPEGRLETYDKRHLFRYANEHQRYVAGCRRLVVEWKGWRINPQICYDLRFPVFCRNRYDVER
SGQLDFDVQLFVANWPSVRAEAWKTLLRARAIENLCYVVGVNRVGVDGNQLHYVGDSAVIDVFGQAQVEIRGREQVVTTV
ISGQVLAEHRARFPAMLDADAFALEMGGY

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=265, Percent_Identity=44.5283018867925, Blast_Score=210, Evalue=8e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30280; Mature: 30280

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLRISLVQGETRWHDAAGNRHYYGALLAPLAGVTDVAVLPETFTSGFSNDVLEDVEGM
CCCEEEEEEECCCEEECCCCCCEEHHHHHHHHCCCCHHEECCHHHHCCCCHHHHHHHCCC
DGPTVAWVLEQAASLEAVVTGSVRLCTPEGVFNRLLWATPEGRLETYDKRHLFRYANEHQ
CCCHHHHHHHHHHCEEEEEECCEEEECCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH
RYVAGCRRLVVEWKGWRINPQICYDLRFPVFCRNRYDVERSGQLDFDVQLFVANWPSVRA
HHHHHHHHHHEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEEECCCCHHH
EAWKTLLRARAIENLCYVVGVNRVGVDGNQLHYVGDSAVIDVFGQAQVEIRGREQVVTTV
HHHHHHHHHHHHHHEEEEEECCEECCCCCEEEEECCCEEEEECCCEEEEECCCHHHHHHH
ISGQVLAEHRARFPAMLDADAFALEMGGY
HCCHHHHHHHHCCCCEECCCCEEEECCCC
>Mature Secondary Structure
MQDLRISLVQGETRWHDAAGNRHYYGALLAPLAGVTDVAVLPETFTSGFSNDVLEDVEGM
CCCEEEEEEECCCEEECCCCCCEEHHHHHHHHCCCCHHEECCHHHHCCCCHHHHHHHCCC
DGPTVAWVLEQAASLEAVVTGSVRLCTPEGVFNRLLWATPEGRLETYDKRHLFRYANEHQ
CCCHHHHHHHHHHCEEEEEECCEEEECCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH
RYVAGCRRLVVEWKGWRINPQICYDLRFPVFCRNRYDVERSGQLDFDVQLFVANWPSVRA
HHHHHHHHHHEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEEECCCCHHH
EAWKTLLRARAIENLCYVVGVNRVGVDGNQLHYVGDSAVIDVFGQAQVEIRGREQVVTTV
HHHHHHHHHHHHHHEEEEEECCEECCCCCEEEEECCCEEEEECCCEEEEECCCHHHHHHH
ISGQVLAEHRARFPAMLDADAFALEMGGY
HCCHHHHHHHHCCCCEECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]