Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682079
Identifier: 182682079
GI number: 182682079
Start: 1731546
End: 1732055
Strand: Reverse
Name: 182682079
Synonym: XfasM23_1557
Alternate gene names: NA
Gene position: 1732055-1731546 (Counterclockwise)
Preceding gene: 182682080
Following gene: 182682075
Centisome position: 68.31
GC content: 53.33
Gene sequence:
>510_bases ATGCATTTTAAGTATTGGGCCATAGCGGTGGCTTTGAGTACGGTTTTATTGACGCCACAAGCCAAAGCTGTAGACGATAT GGGCTGTAAGCTTCGCTTTAATTTGGCTGGTTGGTCGGTGTTCTATAAGACGGCCAGTGGTATTGGTACGGTCACGTGTG CGAATGGCATGGTGGTTCCAGTCACGATTAGCGCCAAGGGGGGGGGGCTGACGTTTGGCAAGTCCAAGATCATTGGTGGG CGCGGCAAGTTCTTTGGGATCTACAACATCAATGATGTGTTTGGCACGTATGGTGGGGCGGAGGCGCATGTCGGGATTGT GAAATCAGGGAACATCCAGTTAGTGACGAAAGGGGATGCGTCGTTGTCTCTAGGCGGGACGGGGAGTGGCATTGATCTTG GTATTGGTTTCGGCAATTTCGTCATTAAACGCCGTGAATCTGGCGGCCAGAGCAATGTTGCGCGGCGTGTGCAGCCACGC TCGGCAGGGGGGTGCAAACCAGCAAGTTGA
Upstream 100 bases:
>100_bases TAATCGGTGATTAGTTGCTGAATGGGCACTTGGGGGTATCTCATCTCCTAGGGGGATGGGCTGCTACAGTCAGCGCCATT GTTCATTTGGAATACCGATC
Downstream 100 bases:
>100_bases GGATTCCGTTGGGGTTGCTATGACGGAATGATGAATGAATGGAGGTGGGGCCTGGGTTTGCTGTGAGTCAGGTGCTGTGT GTGGTTACAGTGGGTGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MHFKYWAIAVALSTVLLTPQAKAVDDMGCKLRFNLAGWSVFYKTASGIGTVTCANGMVVPVTISAKGGGLTFGKSKIIGG RGKFFGIYNINDVFGTYGGAEAHVGIVKSGNIQLVTKGDASLSLGGTGSGIDLGIGFGNFVIKRRESGGQSNVARRVQPR SAGGCKPAS
Sequences:
>Translated_169_residues MHFKYWAIAVALSTVLLTPQAKAVDDMGCKLRFNLAGWSVFYKTASGIGTVTCANGMVVPVTISAKGGGLTFGKSKIIGG RGKFFGIYNINDVFGTYGGAEAHVGIVKSGNIQLVTKGDASLSLGGTGSGIDLGIGFGNFVIKRRESGGQSNVARRVQPR SAGGCKPAS >Mature_169_residues MHFKYWAIAVALSTVLLTPQAKAVDDMGCKLRFNLAGWSVFYKTASGIGTVTCANGMVVPVTISAKGGGLTFGKSKIIGG RGKFFGIYNINDVFGTYGGAEAHVGIVKSGNIQLVTKGDASLSLGGTGSGIDLGIGFGNFVIKRRESGGQSNVARRVQPR SAGGCKPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17407; Mature: 17407
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKYWAIAVALSTVLLTPQAKAVDDMGCKLRFNLAGWSVFYKTASGIGTVTCANGMVVP CCEEHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCEEEEEEECCCCEEEEECCCEEEE VTISAKGGGLTFGKSKIIGGRGKFFGIYNINDVFGTYGGAEAHVGIVKSGNIQLVTKGDA EEEEECCCCEEECCCEEECCCCCEEEEEECHHHHCCCCCCCEEEEEEECCCEEEEEECCC SLSLGGTGSGIDLGIGFGNFVIKRRESGGQSNVARRVQPRSAGGCKPAS EEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MHFKYWAIAVALSTVLLTPQAKAVDDMGCKLRFNLAGWSVFYKTASGIGTVTCANGMVVP CCEEHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCEEEEEEECCCCEEEEECCCEEEE VTISAKGGGLTFGKSKIIGGRGKFFGIYNINDVFGTYGGAEAHVGIVKSGNIQLVTKGDA EEEEECCCCEEECCCEEECCCCCEEEEEECHHHHCCCCCCCEEEEEEECCCEEEEEECCC SLSLGGTGSGIDLGIGFGNFVIKRRESGGQSNVARRVQPRSAGGCKPAS EEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA