Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is mviN [H]
Identifier: 182682045
GI number: 182682045
Start: 1691572
End: 1693182
Strand: Reverse
Name: mviN [H]
Synonym: XfasM23_1523
Alternate gene names: 182682045
Gene position: 1693182-1691572 (Counterclockwise)
Preceding gene: 182682047
Following gene: 182682044
Centisome position: 66.77
GC content: 56.49
Gene sequence:
>1611_bases ATGAGCAAGCCCCATCTGCTTCGAGGATTGCTCTCCTTCAGTACCATGACCACCATTTCGCGTGTGCTGGGCTTGGTGCG GGACCAAGTGATTTCCGCCCAGTTTGGTGCCAATGCCATCACAGACGCCTTCATGGTGGCATTTCGTGTCCCCAATTTCC TGCGTCGCCTGTTTGCCGAAGGCTCATTCGCGACGGCCTTTGTCCCGGTATTTACCGAAGTCAAAGAAACCCGCTCACAC ACTGATCTACGCGCACTGATGGCACGGGTTTCTGGCACCCTGGGCGGCGTCCTATTGGTCGTGACTGCATTGGGACTGTT ATTGGCACCCCAGTTGGCTTGGCTATTCGGCACTGGCGCCAATACTGACCCGGCAAAACAGGGATTGTTGACGGAATTAT TTCGGCTGACCTTCCCATTTCTGTTTTTCGTTTCCCTGACTGCGCTGGCAAGCGGTGCACTGAACAGCTTCCAGCGCTTT GCAATGCCGGCGCTGACCCCCGTCATCCTGAATTTGTGCATGATTAGCAGTGCCTTGTGGCTGGCGCCACGACTGCAAGT GCCCATCCTGGCCCTGGGGTGGGCCGTATTGGCTGCCGGCATCCTGCAATTACTGTTTCAACTTCCGGGATTGCGTCGTA TCGATCTGCTCACCCTGCCACGCTGGGGCTGGAATCATCCTGATGTGCGCAAAATCCTCACACTGATGGTGCCCACCCTG TTTGGTTCTTCCATTGCTCAAATCAACTTGTTAATGGATACCTTCATTGCTGCCCGACTGAGCGACGGCTCCCAGACCTG GTTGTCACTGGCTGACCGCTTTCTGGAACTGCCACTGGGTGTCTTCGGTGTCGCCTTAGGCACCGTTATCTTACCGACCC TGGCACGCCACCACGTCAAGACCGACACCGCCAGTTTCTCCAATGCCTTGGACTGGGGACTCCGCACCACCTTACTCATT GCAGTCCCGGCGATGCTGGCCTTACTGCTGCTGGCTGAGCCATTGGTGTCCACACTATTCCAATACCATCACTTCACCGC CTTTGATGTCCGCATGACGGCCCTTTCAGTCTATGGATTGAGTTTGGGCCTACCTGCCTTCGCACTACTCAAAGTGGTTC TTCCCGCGTTTTACGCACGCCAAGACACCAAGACGCCAGTGCGTGCCGGCATTGCTGCCTTGCTTACCAATATGCTGTTG AATTTTGCATTCCTAGCATTGCTGTACCAGCTGATGGTTCCCGACGCCCTGAAAGCCCAAGGCATCCTGGCCGCCCTGGG CCAACAGCCGGGATTGCATCTGGCCCTAGGCATCGCCAGCGCCTTATCCAGCTACCTCAATCTTGGATTGCTCTGGTATT GGCTCAGCCGCAGCAACATCTACACTCACTCCCCAGGGTGGAGGCCATACATGCTACGTCTGACACTGGCATGTGCCGCA ATGGCTGCAGTCCTACTGGCACTGATGCACTGGCGAACCGATTTCCTCACTATGGACCGTTGGCAAAAGATGGGTTGGTT GGCGATTCTGGTGAGTGCAGGGGGAGGGACCTACCTGGTGACTCAAGTCCTCCTAGGCTGGCGCCTGCATCACCTGCGCC CCAGTGCCTGA
Upstream 100 bases:
>100_bases CAGAAATGCTTTCCTCAGAAATCCATTGATGAAAAATTAGACCGACGATTATGATTTTCATGAATATCTACGTCAAGCTC CACGTACACAGGAGTCAACG
Downstream 100 bases:
>100_bases GCCATTGCAACGCGCACCACTTTGGCAACCTCATCCTTCAGCGTGCCCAAACGAAATGCGCGATGCTCCTCGGCCCTGGT GCAGAAGCCCAGTTATACTT
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSKPHLLRGLLSFSTMTTISRVLGLVRDQVISAQFGANAITDAFMVAFRVPNFLRRLFAEGSFATAFVPVFTEVKETRSH TDLRALMARVSGTLGGVLLVVTALGLLLAPQLAWLFGTGANTDPAKQGLLTELFRLTFPFLFFVSLTALASGALNSFQRF AMPALTPVILNLCMISSALWLAPRLQVPILALGWAVLAAGILQLLFQLPGLRRIDLLTLPRWGWNHPDVRKILTLMVPTL FGSSIAQINLLMDTFIAARLSDGSQTWLSLADRFLELPLGVFGVALGTVILPTLARHHVKTDTASFSNALDWGLRTTLLI AVPAMLALLLLAEPLVSTLFQYHHFTAFDVRMTALSVYGLSLGLPAFALLKVVLPAFYARQDTKTPVRAGIAALLTNMLL NFAFLALLYQLMVPDALKAQGILAALGQQPGLHLALGIASALSSYLNLGLLWYWLSRSNIYTHSPGWRPYMLRLTLACAA MAAVLLALMHWRTDFLTMDRWQKMGWLAILVSAGGGTYLVTQVLLGWRLHHLRPSA
Sequences:
>Translated_536_residues MSKPHLLRGLLSFSTMTTISRVLGLVRDQVISAQFGANAITDAFMVAFRVPNFLRRLFAEGSFATAFVPVFTEVKETRSH TDLRALMARVSGTLGGVLLVVTALGLLLAPQLAWLFGTGANTDPAKQGLLTELFRLTFPFLFFVSLTALASGALNSFQRF AMPALTPVILNLCMISSALWLAPRLQVPILALGWAVLAAGILQLLFQLPGLRRIDLLTLPRWGWNHPDVRKILTLMVPTL FGSSIAQINLLMDTFIAARLSDGSQTWLSLADRFLELPLGVFGVALGTVILPTLARHHVKTDTASFSNALDWGLRTTLLI AVPAMLALLLLAEPLVSTLFQYHHFTAFDVRMTALSVYGLSLGLPAFALLKVVLPAFYARQDTKTPVRAGIAALLTNMLL NFAFLALLYQLMVPDALKAQGILAALGQQPGLHLALGIASALSSYLNLGLLWYWLSRSNIYTHSPGWRPYMLRLTLACAA MAAVLLALMHWRTDFLTMDRWQKMGWLAILVSAGGGTYLVTQVLLGWRLHHLRPSA >Mature_535_residues SKPHLLRGLLSFSTMTTISRVLGLVRDQVISAQFGANAITDAFMVAFRVPNFLRRLFAEGSFATAFVPVFTEVKETRSHT DLRALMARVSGTLGGVLLVVTALGLLLAPQLAWLFGTGANTDPAKQGLLTELFRLTFPFLFFVSLTALASGALNSFQRFA MPALTPVILNLCMISSALWLAPRLQVPILALGWAVLAAGILQLLFQLPGLRRIDLLTLPRWGWNHPDVRKILTLMVPTLF GSSIAQINLLMDTFIAARLSDGSQTWLSLADRFLELPLGVFGVALGTVILPTLARHHVKTDTASFSNALDWGLRTTLLIA VPAMLALLLLAEPLVSTLFQYHHFTAFDVRMTALSVYGLSLGLPAFALLKVVLPAFYARQDTKTPVRAGIAALLTNMLLN FAFLALLYQLMVPDALKAQGILAALGQQPGLHLALGIASALSSYLNLGLLWYWLSRSNIYTHSPGWRPYMLRLTLACAAM AAVLLALMHWRTDFLTMDRWQKMGWLAILVSAGGGTYLVTQVLLGWRLHHLRPSA
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=533, Percent_Identity=38.8367729831145, Blast_Score=367, Evalue=1e-102,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 58680; Mature: 58548
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPHLLRGLLSFSTMTTISRVLGLVRDQVISAQFGANAITDAFMVAFRVPNFLRRLFAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC GSFATAFVPVFTEVKETRSHTDLRALMARVSGTLGGVLLVVTALGLLLAPQLAWLFGTGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NTDPAKQGLLTELFRLTFPFLFFVSLTALASGALNSFQRFAMPALTPVILNLCMISSALW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPRLQVPILALGWAVLAAGILQLLFQLPGLRRIDLLTLPRWGWNHPDVRKILTLMVPTL HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH FGSSIAQINLLMDTFIAARLSDGSQTWLSLADRFLELPLGVFGVALGTVILPTLARHHVK HCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC TDTASFSNALDWGLRTTLLIAVPAMLALLLLAEPLVSTLFQYHHFTAFDVRMTALSVYGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SLGLPAFALLKVVLPAFYARQDTKTPVRAGIAALLTNMLLNFAFLALLYQLMVPDALKAQ HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GILAALGQQPGLHLALGIASALSSYLNLGLLWYWLSRSNIYTHSPGWRPYMLRLTLACAA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHH MAAVLLALMHWRTDFLTMDRWQKMGWLAILVSAGGGTYLVTQVLLGWRLHHLRPSA HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKPHLLRGLLSFSTMTTISRVLGLVRDQVISAQFGANAITDAFMVAFRVPNFLRRLFAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC GSFATAFVPVFTEVKETRSHTDLRALMARVSGTLGGVLLVVTALGLLLAPQLAWLFGTGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NTDPAKQGLLTELFRLTFPFLFFVSLTALASGALNSFQRFAMPALTPVILNLCMISSALW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPRLQVPILALGWAVLAAGILQLLFQLPGLRRIDLLTLPRWGWNHPDVRKILTLMVPTL HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH FGSSIAQINLLMDTFIAARLSDGSQTWLSLADRFLELPLGVFGVALGTVILPTLARHHVK HCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC TDTASFSNALDWGLRTTLLIAVPAMLALLLLAEPLVSTLFQYHHFTAFDVRMTALSVYGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SLGLPAFALLKVVLPAFYARQDTKTPVRAGIAALLTNMLLNFAFLALLYQLMVPDALKAQ HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GILAALGQQPGLHLALGIASALSSYLNLGLLWYWLSRSNIYTHSPGWRPYMLRLTLACAA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHH MAAVLLALMHWRTDFLTMDRWQKMGWLAILVSAGGGTYLVTQVLLGWRLHHLRPSA HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]