Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ribF [H]
Identifier: 182682044
GI number: 182682044
Start: 1690463
End: 1691410
Strand: Reverse
Name: ribF [H]
Synonym: XfasM23_1522
Alternate gene names: 182682044
Gene position: 1691410-1690463 (Counterclockwise)
Preceding gene: 182682045
Following gene: 182682043
Centisome position: 66.7
GC content: 58.02
Gene sequence:
>948_bases ATGGGCAGCGTGTTTAGACATATCGAAGGCGGGATGCTGTTCCCGCAAGGAAGTGTAACCTGCATTGGTGCTTTTGATGG CCTGCACCTGGGGCATCGTGCCCTTGTACGTCATGCCTTACAACGTGCAACTGCATTGCACCTGCCCACCGTTGCCCTGA GCTTTGAACCGCTTCCACGTGAATACTTCGCCTCCACCACCCCGCCCCCGCGTTTGACCCTGACACGCGCCAAAATTCAG GGCCTGCACCGCTTCGGTGCTGATAGCGTCGGCTTACTACGTTTTGACAGCCGCTTGGCATCCATGAGCCCTCAAACCTT TGTCGAGCGTGTTTTGCTCGGACGCTTGGGAGTGCGTGAAGTGCTGATCGGGCCACAGTTCCGCTTTGGACATCAGCGCA GCGGTGATATCGCCTTATTGCAGCGACTGGGCCTGGAGCACGGTTTTACAGCCACCGAGATCCCACCCTTACACCTGAAT AATGAACGCATCTCCGCAACAAAAATCCGCGCCTTGCTGGCAGCGGGCGACTTTGCTCATGCGGCCGAACTACTAGGCCG ACCTTACATGATCGGTGGCCGCGTCGTGCGCGGCCAGCAGCTTGGCAGCACCCTAGGCTACCCGACCGCGAATCTGCGTT TCCCCCATCCCATCGCACTGTCCGGCATTTATGCCACCTGGGTGCATGGCATCTTCGAACAACCCTGGCCTTCCGTCTCC AGCTTCGGCACCCGGCCCACCGTCGCCGGCGTGGAACCACTCCTAGAAGTGCATCTATTCGACTTCCACAGTGACCTCTA TGGACGTCGTATCGACGTCGAATTCATCGCCAAACTACGTGACGAAGAAACATTCCCCGACCTCCACACAATGACCACAC AAATACATCGTGACGCCCAACAGGCGCGCCACATCCTTTCCGAACATCGATTGCGAGCCACCGCGTGA
Upstream 100 bases:
>100_bases GATGCTCCTCGGCCCTGGTGCAGAAGCCCAGTTATACTTCCTAAAAGCGACGCATCACCACGCCCGGCGATCGCCACATC CGGGCTTTTGGGATTGATTA
Downstream 100 bases:
>100_bases GCCAAGACTACAAAACCACCCTGCATCTGCCCGCGACCGACTTCCCCATGCGTGGCGACCTCCCCAAACGTGAACCGGCC ATCCTCGAGCGTTGGGAACG
Product: bifunctional riboflavin kinase/FMN adenylyltransferase
Products: NA
Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGSVFRHIEGGMLFPQGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPREYFASTTPPPRLTLTRAKIQ GLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVREVLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLN NERISATKIRALLAAGDFAHAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALSGIYATWVHGIFEQPWPSVS SFGTRPTVAGVEPLLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHRDAQQARHILSEHRLRATA
Sequences:
>Translated_315_residues MGSVFRHIEGGMLFPQGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPREYFASTTPPPRLTLTRAKIQ GLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVREVLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLN NERISATKIRALLAAGDFAHAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALSGIYATWVHGIFEQPWPSVS SFGTRPTVAGVEPLLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHRDAQQARHILSEHRLRATA >Mature_314_residues GSVFRHIEGGMLFPQGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPREYFASTTPPPRLTLTRAKIQG LHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVREVLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNN ERISATKIRALLAAGDFAHAAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALSGIYATWVHGIFEQPWPSVSS FGTRPTVAGVEPLLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHRDAQQARHILSEHRLRATA
Specific function: Unknown
COG id: COG0196
COG function: function code H; FAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribF family [H]
Homologues:
Organism=Escherichia coli, GI1786208, Length=290, Percent_Identity=43.448275862069, Blast_Score=237, Evalue=9e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015864 - InterPro: IPR015865 - InterPro: IPR002606 - InterPro: IPR014729 [H]
Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]
EC number: =2.7.1.26; =2.7.7.2 [H]
Molecular weight: Translated: 34967; Mature: 34836
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVFRHIEGGMLFPQGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR CCCHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCH EYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE HHHCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHH VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNERISATKIRALLAAGDFAH HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHH AAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALSGIYATWVHGIFEQPWPSVS HHHHHCCCEEECCEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH SFGTRPTVAGVEPLLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHRDAQ HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH QARHILSEHRLRATA HHHHHHHHHHHHCCC >Mature Secondary Structure GSVFRHIEGGMLFPQGSVTCIGAFDGLHLGHRALVRHALQRATALHLPTVALSFEPLPR CCHHHHHCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCH EYFASTTPPPRLTLTRAKIQGLHRFGADSVGLLRFDSRLASMSPQTFVERVLLGRLGVRE HHHCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHH VLIGPQFRFGHQRSGDIALLQRLGLEHGFTATEIPPLHLNNERISATKIRALLAAGDFAH HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCHHH AAELLGRPYMIGGRVVRGQQLGSTLGYPTANLRFPHPIALSGIYATWVHGIFEQPWPSVS HHHHHCCCEEECCEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH SFGTRPTVAGVEPLLEVHLFDFHSDLYGRRIDVEFIAKLRDEETFPDLHTMTTQIHRDAQ HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH QARHILSEHRLRATA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]