Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yeaC [H]
Identifier: 182681658
GI number: 182681658
Start: 1264998
End: 1265951
Strand: Direct
Name: yeaC [H]
Synonym: XfasM23_1116
Alternate gene names: 182681658
Gene position: 1264998-1265951 (Clockwise)
Preceding gene: 182681653
Following gene: 182681659
Centisome position: 49.89
GC content: 55.14
Gene sequence:
>954_bases ATGCCTACATCGTCAACTCAAGGAATGCTAACCGATACGCTACGTCTCTCGCTTGACGAAGCGCAGAATCAAGTGAACAC CCTCTTACTGGGGAAAGAGCAAGAAGTACGTCTTGCCTTCGTCGCACTGCTGTCTGGCGGTCATTTGTTACTGGAAGATC TCCCCGGTCTGGGTAAGACCACCCTAGCGCACGCCTTAGCCTCAAGCTTGGGGCTGACGTTCCGACGTGTGCAATTCACC TCCGACCTGCTGCCCGCTGATGTGCTCGGAATATCGGTGTACAACACGCAGACTCAGCAGTTCGAATTCCATCCAGGTCC CGTGTTCACCCATGTATTGCTAGCCGACGAGATCAACCGGGCACCGCCACGCACACAAAGTGCACTGCTGGAAGCAATGG CTGAACAACAAGTCACCCTTGATGGGATCACCCGATCACTGTCGGACCCCTTCTTCGTGATTGCGACTCAAAATCCTGTC GATCTGTACGGCACTTTTCCATTACCGGATTCGCAATTAGATCGCTTTCTGCTGAGACTCAGCCTAGGTTACCCCAACGC CGAGGCTGAACGCACTCTACTCTCCGGCATGGATCGACGGGAGTTACTGACCCATACCTTGCCACGACTGACAGAAGCCG ACGTGATCTTGTTGCGCAAAACGGTGCTTGGGGTACACGTCAGCGATGCACTCATCGAATACGTACAAGCCCTGTTGCTG CGCAGTCGCCAGCAAAGTGGCGTGCGTGTCGGTTTATCACCACGGGCCGGCATCGCCCTACTACGTGCAGCCAAAGCCTA CGCATTGCTGTCAGGCCGTGAACACGTGCTCCCTGAAGACATTCAGGAACTATTCGTTTCAGTTGCTGGACACCGTCTCG TGCCAGAGGCTGAAACCTCTTCCACCGGCGCAGCGCTGGCTCAGACATTGCTATACACCGTACCGGTGGATTGA
Upstream 100 bases:
>100_bases CTTTGACGGCAGTTACCAGCGCCCACAGGATCACAAATATCCGATAGGCACGCTGATCTTCCTGGATGACCCCCACCCCT TCTTTAGACATTGGATCGTA
Downstream 100 bases:
>100_bases ACGTGCGTACCTTCCTACGCCACTGGATTCAACGCGCTGCGATGCTGGCACGCCCGCGTGCTCCTGAATCCCTGCCGGTC ACACTAAATAGCCAGCGCAT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MPTSSTQGMLTDTLRLSLDEAQNQVNTLLLGKEQEVRLAFVALLSGGHLLLEDLPGLGKTTLAHALASSLGLTFRRVQFT SDLLPADVLGISVYNTQTQQFEFHPGPVFTHVLLADEINRAPPRTQSALLEAMAEQQVTLDGITRSLSDPFFVIATQNPV DLYGTFPLPDSQLDRFLLRLSLGYPNAEAERTLLSGMDRRELLTHTLPRLTEADVILLRKTVLGVHVSDALIEYVQALLL RSRQQSGVRVGLSPRAGIALLRAAKAYALLSGREHVLPEDIQELFVSVAGHRLVPEAETSSTGAALAQTLLYTVPVD
Sequences:
>Translated_317_residues MPTSSTQGMLTDTLRLSLDEAQNQVNTLLLGKEQEVRLAFVALLSGGHLLLEDLPGLGKTTLAHALASSLGLTFRRVQFT SDLLPADVLGISVYNTQTQQFEFHPGPVFTHVLLADEINRAPPRTQSALLEAMAEQQVTLDGITRSLSDPFFVIATQNPV DLYGTFPLPDSQLDRFLLRLSLGYPNAEAERTLLSGMDRRELLTHTLPRLTEADVILLRKTVLGVHVSDALIEYVQALLL RSRQQSGVRVGLSPRAGIALLRAAKAYALLSGREHVLPEDIQELFVSVAGHRLVPEAETSSTGAALAQTLLYTVPVD >Mature_316_residues PTSSTQGMLTDTLRLSLDEAQNQVNTLLLGKEQEVRLAFVALLSGGHLLLEDLPGLGKTTLAHALASSLGLTFRRVQFTS DLLPADVLGISVYNTQTQQFEFHPGPVFTHVLLADEINRAPPRTQSALLEAMAEQQVTLDGITRSLSDPFFVIATQNPVD LYGTFPLPDSQLDRFLLRLSLGYPNAEAERTLLSGMDRRELLTHTLPRLTEADVILLRKTVLGVHVSDALIEYVQALLLR SRQQSGVRVGLSPRAGIALLRAAKAYALLSGREHVLPEDIQELFVSVAGHRLVPEAETSSTGAALAQTLLYTVPVD
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 34546; Mature: 34415
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSSTQGMLTDTLRLSLDEAQNQVNTLLLGKEQEVRLAFVALLSGGHLLLEDLPGLGKT CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCEEEECCCCCCCHH TLAHALASSLGLTFRRVQFTSDLLPADVLGISVYNTQTQQFEFHPGPVFTHVLLADEINR HHHHHHHHHHCCCCEEEHHHHCCCCHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHCC APPRTQSALLEAMAEQQVTLDGITRSLSDPFFVIATQNPVDLYGTFPLPDSQLDRFLLRL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHH SLGYPNAEAERTLLSGMDRRELLTHTLPRLTEADVILLRKTVLGVHVSDALIEYVQALLL HCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRQQSGVRVGLSPRAGIALLRAAKAYALLSGREHVLPEDIQELFVSVAGHRLVPEAETS HHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC STGAALAQTLLYTVPVD CHHHHHHHHHHHCCCCC >Mature Secondary Structure PTSSTQGMLTDTLRLSLDEAQNQVNTLLLGKEQEVRLAFVALLSGGHLLLEDLPGLGKT CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCEEEECCCCCCCHH TLAHALASSLGLTFRRVQFTSDLLPADVLGISVYNTQTQQFEFHPGPVFTHVLLADEINR HHHHHHHHHHCCCCEEEHHHHCCCCHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHCC APPRTQSALLEAMAEQQVTLDGITRSLSDPFFVIATQNPVDLYGTFPLPDSQLDRFLLRL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHH SLGYPNAEAERTLLSGMDRRELLTHTLPRLTEADVILLRKTVLGVHVSDALIEYVQALLL HCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRQQSGVRVGLSPRAGIALLRAAKAYALLSGREHVLPEDIQELFVSVAGHRLVPEAETS HHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC STGAALAQTLLYTVPVD CHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]