Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681659
Identifier: 182681659
GI number: 182681659
Start: 1265954
End: 1266913
Strand: Direct
Name: 182681659
Synonym: XfasM23_1117
Alternate gene names: NA
Gene position: 1265954-1266913 (Clockwise)
Preceding gene: 182681658
Following gene: 182681660
Centisome position: 49.93
GC content: 56.25
Gene sequence:
>960_bases GTGCGTACCTTCCTACGCCACTGGATTCAACGCGCTGCGATGCTGGCACGCCCGCGTGCTCCTGAATCCCTGCCGGTCAC ACTAAATAGCCAGCGCATTTACATGCTGCCCACTCCTTTCGGCCTATTCTTCGCCATAGTCATGCTAGCGATGCTGGCAG GAGGACTGAACTACAACAACAACATGACACTCCTATTGACACTCCTGCTCAGTGGAGCTGGCATTGGCAGTGCATTAGCC ACGCACCTACAGCTTGCTGGACTTCGTTTGGAAATACTCCCATCCAAGCCGGCCGCAGCGGGGCAACCACTGCAATTGCG ACTTCTACTGGATAGCACCCAGCTACGCTCACGTCCCGGGCTGCAGCTTAAGCATGAAGACGCACAGACGTATTGCTCGC TGCTTCCAGGAGTCCCTGTCGAAGTCGATTTGAAGATCACTAACACGCAGCGTGGCTGGCGCAGCTTGTCACGTATTCGG ATCTCCACGGTACAACCACTCGGGTTGATCACGGCTTGGTCCTGGGTATGGCCAGAACAACCGTTGCTGGTGTACCCAAC TGCGGAACAAAGCGGTCCACCACCTCCGATCAGCGATAGCAATAAGGCGCATCGGTGGCGACACAGCTCGCAGAGTGAAG AAATGCATCAATTACGCTCGTATCGGGCTGGCGATGCTGCCCGTACCATCGCCTGGAAACACTCAGCACGATGCAGCGCA CTGTTAGTCCATGAGTATCAACAACCTGCCGCATTGGAAGTGTTCCTGGATTGGAACCAGCTGCACACCCTCCCCTACGA GCATCGCATCACACGCTTGACGCGTTGGATCAACGAAGCCGAGCGGGAAGGCTGGCGCTATCGCTTATCTCTTCCCGGTC ATCCTGAATTGGACTATGGCCACGGTGCCGTCCATCACCACCGCTGCTTGCGCCTACTGGCTCTCTTACCACATGTCTAA
Upstream 100 bases:
>100_bases TTTCAGTTGCTGGACACCGTCTCGTGCCAGAGGCTGAAACCTCTTCCACCGGCGCAGCGCTGGCTCAGACATTGCTATAC ACCGTACCGGTGGATTGAAC
Downstream 100 bases:
>100_bases ACCGGGTTTGCCTTTGCCTTCTTTCACAAGCCGTGTCTGTGCGCTGATCACAGCCTGGCTCGCACTGATACCGTTATTAC TACAGATACCTGCTCTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRTFLRHWIQRAAMLARPRAPESLPVTLNSQRIYMLPTPFGLFFAIVMLAMLAGGLNYNNNMTLLLTLLLSGAGIGSALA THLQLAGLRLEILPSKPAAAGQPLQLRLLLDSTQLRSRPGLQLKHEDAQTYCSLLPGVPVEVDLKITNTQRGWRSLSRIR ISTVQPLGLITAWSWVWPEQPLLVYPTAEQSGPPPPISDSNKAHRWRHSSQSEEMHQLRSYRAGDAARTIAWKHSARCSA LLVHEYQQPAALEVFLDWNQLHTLPYEHRITRLTRWINEAEREGWRYRLSLPGHPELDYGHGAVHHHRCLRLLALLPHV
Sequences:
>Translated_319_residues MRTFLRHWIQRAAMLARPRAPESLPVTLNSQRIYMLPTPFGLFFAIVMLAMLAGGLNYNNNMTLLLTLLLSGAGIGSALA THLQLAGLRLEILPSKPAAAGQPLQLRLLLDSTQLRSRPGLQLKHEDAQTYCSLLPGVPVEVDLKITNTQRGWRSLSRIR ISTVQPLGLITAWSWVWPEQPLLVYPTAEQSGPPPPISDSNKAHRWRHSSQSEEMHQLRSYRAGDAARTIAWKHSARCSA LLVHEYQQPAALEVFLDWNQLHTLPYEHRITRLTRWINEAEREGWRYRLSLPGHPELDYGHGAVHHHRCLRLLALLPHV >Mature_319_residues MRTFLRHWIQRAAMLARPRAPESLPVTLNSQRIYMLPTPFGLFFAIVMLAMLAGGLNYNNNMTLLLTLLLSGAGIGSALA THLQLAGLRLEILPSKPAAAGQPLQLRLLLDSTQLRSRPGLQLKHEDAQTYCSLLPGVPVEVDLKITNTQRGWRSLSRIR ISTVQPLGLITAWSWVWPEQPLLVYPTAEQSGPPPPISDSNKAHRWRHSSQSEEMHQLRSYRAGDAARTIAWKHSARCSA LLVHEYQQPAALEVFLDWNQLHTLPYEHRITRLTRWINEAEREGWRYRLSLPGHPELDYGHGAVHHHRCLRLLALLPHV
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36180; Mature: 36180
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFLRHWIQRAAMLARPRAPESLPVTLNSQRIYMLPTPFGLFFAIVMLAMLAGGLNYNN CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC NMTLLLTLLLSGAGIGSALATHLQLAGLRLEILPSKPAAAGQPLQLRLLLDSTQLRSRPG CHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEEECCHHHCCCCC LQLKHEDAQTYCSLLPGVPVEVDLKITNTQRGWRSLSRIRISTVQPLGLITAWSWVWPEQ CEEECHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHEEHCCCCCC PLLVYPTAEQSGPPPPISDSNKAHRWRHSSQSEEMHQLRSYRAGDAARTIAWKHSARCSA CEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCCE LLVHEYQQPAALEVFLDWNQLHTLPYEHRITRLTRWINEAEREGWRYRLSLPGHPELDYG EEEHHCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC HGAVHHHRCLRLLALLPHV CCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTFLRHWIQRAAMLARPRAPESLPVTLNSQRIYMLPTPFGLFFAIVMLAMLAGGLNYNN CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC NMTLLLTLLLSGAGIGSALATHLQLAGLRLEILPSKPAAAGQPLQLRLLLDSTQLRSRPG CHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEEECCHHHCCCCC LQLKHEDAQTYCSLLPGVPVEVDLKITNTQRGWRSLSRIRISTVQPLGLITAWSWVWPEQ CEEECHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHEEHCCCCCC PLLVYPTAEQSGPPPPISDSNKAHRWRHSSQSEEMHQLRSYRAGDAARTIAWKHSARCSA CEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCCE LLVHEYQQPAALEVFLDWNQLHTLPYEHRITRLTRWINEAEREGWRYRLSLPGHPELDYG EEEHHCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC HGAVHHHRCLRLLALLPHV CCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA