| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681566
Identifier: 182681566
GI number: 182681566
Start: 1177730
End: 1178011
Strand: Direct
Name: 182681566
Synonym: XfasM23_1024
Alternate gene names: NA
Gene position: 1177730-1178011 (Clockwise)
Preceding gene: 182681565
Following gene: 182681580
Centisome position: 46.45
GC content: 48.23
Gene sequence:
>282_bases ATGACTAAGATAGAAACTTTTAACAGCGTATGGGATGCCTTAGCAGATACACCAGAACAGGCTGCAAATCTTCGTGCCAG GGCTGAACTCATGCGGCAAATCGCGGCAGTCATTGAAGCAAACGACTGGAATCAATCACAAGCTGCAACACACTGCGGTG TGACCCAACCACGTATCAACGACTTATTACGTGGTCGTATCTCGCGGTTCTCATTAGATGCTTTAGTCAACATCGCCACT GCCATCGGACGGCGCGTTCATGTGAAATTAGAAGCGGCATAA
Upstream 100 bases:
>100_bases TTTATGTCTTACATGCTTTTCAAAAGAAGACGCAAGCCACAAGCAAACGCGATGTAGAACTTGCTAAGAGGCGATACACC GAACTTACAAAAGGTGCCAA
Downstream 100 bases:
>100_bases AAATCAAAAACAGAACGTGTTGGTCACCGGGGTGAGATTTACCGATAGGCTGGACGGATCAAAACGCCACAGCACTACCG GTATTGCGCAGCGCCATCTG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Phage Associated Protein; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTKIETFNSVWDALADTPEQAANLRARAELMRQIAAVIEANDWNQSQAATHCGVTQPRINDLLRGRISRFSLDALVNIAT AIGRRVHVKLEAA
Sequences:
>Translated_93_residues MTKIETFNSVWDALADTPEQAANLRARAELMRQIAAVIEANDWNQSQAATHCGVTQPRINDLLRGRISRFSLDALVNIAT AIGRRVHVKLEAA >Mature_92_residues TKIETFNSVWDALADTPEQAANLRARAELMRQIAAVIEANDWNQSQAATHCGVTQPRINDLLRGRISRFSLDALVNIATA IGRRVHVKLEAA
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10283; Mature: 10152
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIETFNSVWDALADTPEQAANLRARAELMRQIAAVIEANDWNQSQAATHCGVTQPRIN CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHH DLLRGRISRFSLDALVNIATAIGRRVHVKLEAA HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure TKIETFNSVWDALADTPEQAANLRARAELMRQIAAVIEANDWNQSQAATHCGVTQPRIN CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHH DLLRGRISRFSLDALVNIATAIGRRVHVKLEAA HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA