| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681580
Identifier: 182681580
GI number: 182681580
Start: 1188103
End: 1188441
Strand: Direct
Name: 182681580
Synonym: XfasM23_1038
Alternate gene names: NA
Gene position: 1188103-1188441 (Clockwise)
Preceding gene: 182681566
Following gene: 182681581
Centisome position: 46.86
GC content: 53.69
Gene sequence:
>339_bases ATGGAAGGGGCCAAACCGATTGAATTCAGAGGCAGTGCTCTTGACGATTTACGCACTTTTCCAGTGAGCGTAAGACGTGA GGCCGGGTACCAGCTTCACCAAGTGCAAAACGGACGCGACGCTGACGACTGGAAGCCCATGCCTACGGTAGGGCGTGGAG TCCGCGAGATTCGCATCCGTGACGCAGACGGCGCTTTCCGCGTTATCTACGTCGCCACGCTGCCCGAGGCTGTCTATGTG TTGCATTGCTTCCAAAAGAAAACTGAGAAAACCACCAAAGGCGATCTTGATGTAGCGGCTAAACGCTACCGTGATCTGTT TAATGAGGTAGGACAATGA
Upstream 100 bases:
>100_bases TGCAAGCGCAGTAGCTCCGGTAATGTCAACATCTGGAACCTACATTCCGTGGGCCGACAAAGATATCCTTGCGCTCATAC AAAGTTTTGTATCATGGCGC
Downstream 100 bases:
>100_bases GCAACGAGCGATTCACAAGTGTGTGGGATGCCATTGAGGACACTCCCGAAGCCGCCGAAAACATGAAGTTACGTTCCGCA CTCATGATGGCCCTGAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MEGAKPIEFRGSALDDLRTFPVSVRREAGYQLHQVQNGRDADDWKPMPTVGRGVREIRIRDADGAFRVIYVATLPEAVYV LHCFQKKTEKTTKGDLDVAAKRYRDLFNEVGQ
Sequences:
>Translated_112_residues MEGAKPIEFRGSALDDLRTFPVSVRREAGYQLHQVQNGRDADDWKPMPTVGRGVREIRIRDADGAFRVIYVATLPEAVYV LHCFQKKTEKTTKGDLDVAAKRYRDLFNEVGQ >Mature_112_residues MEGAKPIEFRGSALDDLRTFPVSVRREAGYQLHQVQNGRDADDWKPMPTVGRGVREIRIRDADGAFRVIYVATLPEAVYV LHCFQKKTEKTTKGDLDVAAKRYRDLFNEVGQ
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12754; Mature: 12754
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGAKPIEFRGSALDDLRTFPVSVRREAGYQLHQVQNGRDADDWKPMPTVGRGVREIRIR CCCCCCCCCCCCCHHHHHHCCCHHHHHCCCEEEHHCCCCCCCCCCCCCCHHCCCEEEEEE DADGAFRVIYVATLPEAVYVLHCFQKKTEKTTKGDLDVAAKRYRDLFNEVGQ CCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEGAKPIEFRGSALDDLRTFPVSVRREAGYQLHQVQNGRDADDWKPMPTVGRGVREIRIR CCCCCCCCCCCCCHHHHHHCCCHHHHHCCCEEEHHCCCCCCCCCCCCCCHHCCCEEEEEE DADGAFRVIYVATLPEAVYVLHCFQKKTEKTTKGDLDVAAKRYRDLFNEVGQ CCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA