| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681565
Identifier: 182681565
GI number: 182681565
Start: 1177407
End: 1177733
Strand: Direct
Name: 182681565
Synonym: XfasM23_1023
Alternate gene names: NA
Gene position: 1177407-1177733 (Clockwise)
Preceding gene: 182681550
Following gene: 182681566
Centisome position: 46.43
GC content: 47.4
Gene sequence:
>327_bases ATGAAGGTACTCCGATTCCTTGGTGACTCACTGATGTGCTTGCGGCAGTTCCCAGAGGACGCATGCAGCGATGCAGGCTA CCAACTGGACAAGATACAGCGTGGTGAGCAGCCTAAAGACTTCAAACCGATGCCTTCCATTGGTAAAGGTGTTGAAGAGT TACGAATCTGGGATGACTCTGGTACTTATCGTGTTGTCTACACTGCAAGATTGGCTGATGCCGTTTATGTCTTACATGCT TTTCAAAAGAAGACGCAAGCCACAAGCAAACGCGATGTAGAACTTGCTAAGAGGCGATACACCGAACTTACAAAAGGTGC CAAATGA
Upstream 100 bases:
>100_bases CCAGGGTGATGGTGCCGATGTGGCGGTGGGTCAGGGTGATCATGAGGGGGTGGAAAAATATCAATGGTGATTTATATCCA TACGGATATAATGCAGTTCC
Downstream 100 bases:
>100_bases CTAAGATAGAAACTTTTAACAGCGTATGGGATGCCTTAGCAGATACACCAGAACAGGCTGCAAATCTTCGTGCCAGGGCT GAACTCATGCGGCAAATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKVLRFLGDSLMCLRQFPEDACSDAGYQLDKIQRGEQPKDFKPMPSIGKGVEELRIWDDSGTYRVVYTARLADAVYVLHA FQKKTQATSKRDVELAKRRYTELTKGAK
Sequences:
>Translated_108_residues MKVLRFLGDSLMCLRQFPEDACSDAGYQLDKIQRGEQPKDFKPMPSIGKGVEELRIWDDSGTYRVVYTARLADAVYVLHA FQKKTQATSKRDVELAKRRYTELTKGAK >Mature_108_residues MKVLRFLGDSLMCLRQFPEDACSDAGYQLDKIQRGEQPKDFKPMPSIGKGVEELRIWDDSGTYRVVYTARLADAVYVLHA FQKKTQATSKRDVELAKRRYTELTKGAK
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12375; Mature: 12375
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLRFLGDSLMCLRQFPEDACSDAGYQLDKIQRGEQPKDFKPMPSIGKGVEELRIWDDS CHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHEEECCC GTYRVVYTARLADAVYVLHAFQKKTQATSKRDVELAKRRYTELTKGAK CCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKVLRFLGDSLMCLRQFPEDACSDAGYQLDKIQRGEQPKDFKPMPSIGKGVEELRIWDDS CHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHEEECCC GTYRVVYTARLADAVYVLHAFQKKTQATSKRDVELAKRRYTELTKGAK CCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA