| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is insQ [H]
Identifier: 182681550
GI number: 182681550
Start: 1165131
End: 1165355
Strand: Direct
Name: insQ [H]
Synonym: XfasM23_1005
Alternate gene names: 182681550
Gene position: 1165131-1165355 (Clockwise)
Preceding gene: 182681544
Following gene: 182681565
Centisome position: 45.95
GC content: 48.0
Gene sequence:
>225_bases GTGAAGGACGTTACCGTCAACCAGTCATGCGGCAAGTGGTATGTCAGCATCCAAACAGCCGATGAAATCACTGAACCGGT TCACCCCTCCAACCTTAATCGAGGGATTGATGCTGGTGTTACTCAACTGACCACACAGTCAGATGGCACCATCTACCTTC CGGTGAACAGTTTTAAATCTAGACAGAAACCGCAAATATCCGTCCGTAAGGACTACCTTCACTAA
Upstream 100 bases:
>100_bases GGATTGGGGACATGCCTACGCCAACCTCTTCGCCAAACGGACCGATTTCCAACGTTTCAAGAAGATACGCTATCGCAACA GCCGTAATGTCTTGGGCACG
Downstream 100 bases:
>100_bases GGTTACAACGACTATCAGCAAAAAATCCCACGCCATGATTGTCATTGAGGATTTGAACGCTCCAAGGCATCTTTGACGGA TTCTCCTTGCCGTTTGCCTA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MKDVTVNQSCGKWYVSIQTADEITEPVHPSNLNRGIDAGVTQLTTQSDGTIYLPVNSFKSRQKPQISVRKDYLH
Sequences:
>Translated_74_residues MKDVTVNQSCGKWYVSIQTADEITEPVHPSNLNRGIDAGVTQLTTQSDGTIYLPVNSFKSRQKPQISVRKDYLH >Mature_74_residues MKDVTVNQSCGKWYVSIQTADEITEPVHPSNLNRGIDAGVTQLTTQSDGTIYLPVNSFKSRQKPQISVRKDYLH
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transposase 35 family [H]
Homologues:
Organism=Escherichia coli, GI288549314, Length=63, Percent_Identity=61.9047619047619, Blast_Score=87, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001959 - InterPro: IPR010095 - InterPro: IPR021027 [H]
Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]
EC number: NA
Molecular weight: Translated: 8306; Mature: 8306
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDVTVNQSCGKWYVSIQTADEITEPVHPSNLNRGIDAGVTQLTTQSDGTIYLPVNSFKS CCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC RQKPQISVRKDYLH CCCCCCCCCCCCCC >Mature Secondary Structure MKDVTVNQSCGKWYVSIQTADEITEPVHPSNLNRGIDAGVTQLTTQSDGTIYLPVNSFKS CCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCC RQKPQISVRKDYLH CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]