| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681427
Identifier: 182681427
GI number: 182681427
Start: 1038425
End: 1038931
Strand: Reverse
Name: 182681427
Synonym: XfasM23_0878
Alternate gene names: NA
Gene position: 1038931-1038425 (Counterclockwise)
Preceding gene: 182681428
Following gene: 182681426
Centisome position: 40.97
GC content: 39.45
Gene sequence:
>507_bases ATGAAATCAGAAAACGACAATGCTGATTACAGCATTATTCTCTCTCAACTGAGAATCGCGAGACTTTTTGGGCACAACTT ACTGGTTCTTAAAGATAATTCTGGTAAGTTAATATCAGAAATAGACGGACTGGCAACCAGCAAAAACGGGGAAACAAAAC CTGTTGGGTATTTGCCTTCTGACAGACTTAAAGCGTTTGAGTTCAAGTCTGCGTTATTATATAAAAGCTCACAGGCGCAG ATAGCATTGATCAATGCGAATAAGGAAATCTGTCTGAATAAATGGAATGTTGCATTAAACGCAATTACTCTTATCAATAC AAAAAATCTCCCCTATCCTATATTTGGGCTCGGTAAAAATAGTAATTCAGTAACCAGTACACTGATAAGATGTATGGATC TGCATGAACCCCAAATACCCTCCGGGGGGATTGCCCCATTTTCAGGGGAAATACTGCTTAGCGAAGCAGAAATAGAAAAA CTCCAGAGCGCGTTGATCTCAAGGTAA
Upstream 100 bases:
>100_bases TTTATTAACTATTCCTAAATAAGATGATGTTTCAATAAGTGCATGACTAAAAATTTGCAGTAAAATTTCCCTAAAAAAAA TATATAATTAGAGAGTAATA
Downstream 100 bases:
>100_bases AAACAGGAAAACGCAAATTGCGGACACAGACTGTTCAGGTACCCCTTAGAAGCTGAAGCACTGGTAAGAAGTAGATTGCT ACGACCTATGAATTAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKSENDNADYSIILSQLRIARLFGHNLLVLKDNSGKLISEIDGLATSKNGETKPVGYLPSDRLKAFEFKSALLYKSSQAQ IALINANKEICLNKWNVALNAITLINTKNLPYPIFGLGKNSNSVTSTLIRCMDLHEPQIPSGGIAPFSGEILLSEAEIEK LQSALISR
Sequences:
>Translated_168_residues MKSENDNADYSIILSQLRIARLFGHNLLVLKDNSGKLISEIDGLATSKNGETKPVGYLPSDRLKAFEFKSALLYKSSQAQ IALINANKEICLNKWNVALNAITLINTKNLPYPIFGLGKNSNSVTSTLIRCMDLHEPQIPSGGIAPFSGEILLSEAEIEK LQSALISR >Mature_168_residues MKSENDNADYSIILSQLRIARLFGHNLLVLKDNSGKLISEIDGLATSKNGETKPVGYLPSDRLKAFEFKSALLYKSSQAQ IALINANKEICLNKWNVALNAITLINTKNLPYPIFGLGKNSNSVTSTLIRCMDLHEPQIPSGGIAPFSGEILLSEAEIEK LQSALISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18387; Mature: 18387
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSENDNADYSIILSQLRIARLFGHNLLVLKDNSGKLISEIDGLATSKNGETKPVGYLPS CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCEECCCCCCCCCCCCCC DRLKAFEFKSALLYKSSQAQIALINANKEICLNKWNVALNAITLINTKNLPYPIFGLGKN CHHHHHHHHHHHEEECCCCEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCCEEEECCC SNSVTSTLIRCMDLHEPQIPSGGIAPFSGEILLSEAEIEKLQSALISR CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKSENDNADYSIILSQLRIARLFGHNLLVLKDNSGKLISEIDGLATSKNGETKPVGYLPS CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCEECCCCCCCCCCCCCC DRLKAFEFKSALLYKSSQAQIALINANKEICLNKWNVALNAITLINTKNLPYPIFGLGKN CHHHHHHHHHHHEEECCCCEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCCEEEECCC SNSVTSTLIRCMDLHEPQIPSGGIAPFSGEILLSEAEIEKLQSALISR CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA