| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681300
Identifier: 182681300
GI number: 182681300
Start: 880301
End: 880747
Strand: Reverse
Name: 182681300
Synonym: XfasM23_0746
Alternate gene names: NA
Gene position: 880747-880301 (Counterclockwise)
Preceding gene: 182681302
Following gene: 182681299
Centisome position: 34.73
GC content: 51.45
Gene sequence:
>447_bases ATGTCTGTATTCCGTACGCTGACCGTTCTCTCCCTATTGCTACTTAGCAATTACGCCAGAGCAGATGGACACTGGGTCAA TCTCGGTGGTCAACGCTACCAGGTGGAGCTAGCACAAACTGAAGAAAGCCGCGCGCTCGGGCTGATGTTTCGAACAAAAA TGGCAGCAGATCACGGCATGTTGTTCATCCACGACCGTCAAGAACCTCAAGCATATTGGATGAAAAATACCAAGATCGCG TTGGACATCTTGTATTTCGATGAACAAGGAAAACTGGTAAGCCAGCAACGTAACGTGCCGCCGTGCCCAGCAGGTGAAGC GTGCCCACCCTACCCAAGTAATGCACCGGTACGCTACGTACTGGAACTCAACGCTGGTCAGGCTGCACGCCTTGATCTGA AAGATGGTACCCAACTGGTATTCGGACCAGGCATTCCCAAACTCTGA
Upstream 100 bases:
>100_bases AATTTGCCCCTTCAAAGCGAAGGCTGAGCACCAATACTCACTCGACGCAACAGAAAATACGCTACCCTTCTAGGGTTCAT CCTCAATCGACAGCATTGCT
Downstream 100 bases:
>100_bases TTAATCGGTTTTGCCATTGGCCATAGATCGGCAGGCCCCTTTCAGAAAACGTTGGGCTTGAATAAAGAGACACTTGGCAC CACCCTGTGTTTCATGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSVFRTLTVLSLLLLSNYARADGHWVNLGGQRYQVELAQTEESRALGLMFRTKMAADHGMLFIHDRQEPQAYWMKNTKIA LDILYFDEQGKLVSQQRNVPPCPAGEACPPYPSNAPVRYVLELNAGQAARLDLKDGTQLVFGPGIPKL
Sequences:
>Translated_148_residues MSVFRTLTVLSLLLLSNYARADGHWVNLGGQRYQVELAQTEESRALGLMFRTKMAADHGMLFIHDRQEPQAYWMKNTKIA LDILYFDEQGKLVSQQRNVPPCPAGEACPPYPSNAPVRYVLELNAGQAARLDLKDGTQLVFGPGIPKL >Mature_147_residues SVFRTLTVLSLLLLSNYARADGHWVNLGGQRYQVELAQTEESRALGLMFRTKMAADHGMLFIHDRQEPQAYWMKNTKIAL DILYFDEQGKLVSQQRNVPPCPAGEACPPYPSNAPVRYVLELNAGQAARLDLKDGTQLVFGPGIPKL
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16560; Mature: 16429
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFRTLTVLSLLLLSNYARADGHWVNLGGQRYQVELAQTEESRALGLMFRTKMAADHGM CCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCEEEEEEEEEECCCCCE LFIHDRQEPQAYWMKNTKIALDILYFDEQGKLVSQQRNVPPCPAGEACPPYPSNAPVRYV EEEECCCCCCEEEECCCEEEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCCCCCCCEEEE LELNAGQAARLDLKDGTQLVFGPGIPKL EEECCCCEEEEECCCCCEEEECCCCCCC >Mature Secondary Structure SVFRTLTVLSLLLLSNYARADGHWVNLGGQRYQVELAQTEESRALGLMFRTKMAADHGM CHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCEEEEEEEEEECCCCCE LFIHDRQEPQAYWMKNTKIALDILYFDEQGKLVSQQRNVPPCPAGEACPPYPSNAPVRYV EEEECCCCCCEEEECCCEEEEEEEEECCCCCEEHHCCCCCCCCCCCCCCCCCCCCCEEEE LELNAGQAARLDLKDGTQLVFGPGIPKL EEECCCCEEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA