| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681302
Identifier: 182681302
GI number: 182681302
Start: 884016
End: 884801
Strand: Reverse
Name: 182681302
Synonym: XfasM23_0749
Alternate gene names: NA
Gene position: 884801-884016 (Counterclockwise)
Preceding gene: 182681303
Following gene: 182681300
Centisome position: 34.89
GC content: 53.18
Gene sequence:
>786_bases ATGAAACTTTCTAAAATTGCACTGCTAATAACCGCCATGACCTCTGGGGGCGTGATGGCGAACGATATTGTGACGCTGAA ATTCAGCGACGCCCGTAAAGACGTAAAGGGCATCAAGGCCGTCAACGCGGTGCTGAATCCGATCGGTGTCAATGTCACCA CCATTGAAATCCCTGAAGCCGCGAAACCGATCCTCAGGGCATCGGAAAGCCGAGCACTTACCAAAGAAGAGCACGCTTTT CTGATCAAAGAGTTTAACCTGACTCAGGAGCAGCTGCTGGAGCAAATCAAACTTGCAGGACGTACGCCGGCAGTAAAAGG CGGCGGCGTGCTGACAGAGGAAACAGGTTTTGGGCCGTATCCGAAAGTGTATGACATGCTGTCTCTGGATAAAGAAACCC ACAAGGGCGTACTGGAAAAATATGGCCGCATGCATGTCAACTCTGCTGAAGATGGCACTGACGTGGATGAAGTGATGACG GTGGTCAGCGGCGGTCCGTTCCGCTGGGGCTTCACCCTGAAAGACGGCTCCATTGCACGCTTCCAGGTAGAAAAAGTTGG ACTCAATGACAAGGCTGTGCGCGTGAGCTATCACGGTCTCGGCATGCACGCCGGCATCATGGATGCAAAACAGGGTCTGA TTGTTGCCTTCGTCCACGGTCCGCAGGAGTTCACCATGCGCTATAAGGCGAACGTGCCACTGCCGCATGCGAAACTGCTG GGCACCAATCCGTGGATCGATTTCAGCGGTAACTACCCGGTCGTGCTCGATAAAGTGAAACACTAA
Upstream 100 bases:
>100_bases ATAGGCATGGATGTGATTAAATTCTGAAAATAATTGCGATATTAATCCTATTATTTTTGTGGCGGAAAACTATATATCCA TACCCAAACAAGGAATTCAT
Downstream 100 bases:
>100_bases TTTATGGTCATAGCAGGGTAATGCACTTCATTCTGCCCTTTTCCCTTCAATATCATACTATTAGCTTGCTTCAGCCATTG CGTAGGGTAGTGAATGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKLSKIALLITAMTSGGVMANDIVTLKFSDARKDVKGIKAVNAVLNPIGVNVTTIEIPEAAKPILRASESRALTKEEHAF LIKEFNLTQEQLLEQIKLAGRTPAVKGGGVLTEETGFGPYPKVYDMLSLDKETHKGVLEKYGRMHVNSAEDGTDVDEVMT VVSGGPFRWGFTLKDGSIARFQVEKVGLNDKAVRVSYHGLGMHAGIMDAKQGLIVAFVHGPQEFTMRYKANVPLPHAKLL GTNPWIDFSGNYPVVLDKVKH
Sequences:
>Translated_261_residues MKLSKIALLITAMTSGGVMANDIVTLKFSDARKDVKGIKAVNAVLNPIGVNVTTIEIPEAAKPILRASESRALTKEEHAF LIKEFNLTQEQLLEQIKLAGRTPAVKGGGVLTEETGFGPYPKVYDMLSLDKETHKGVLEKYGRMHVNSAEDGTDVDEVMT VVSGGPFRWGFTLKDGSIARFQVEKVGLNDKAVRVSYHGLGMHAGIMDAKQGLIVAFVHGPQEFTMRYKANVPLPHAKLL GTNPWIDFSGNYPVVLDKVKH >Mature_261_residues MKLSKIALLITAMTSGGVMANDIVTLKFSDARKDVKGIKAVNAVLNPIGVNVTTIEIPEAAKPILRASESRALTKEEHAF LIKEFNLTQEQLLEQIKLAGRTPAVKGGGVLTEETGFGPYPKVYDMLSLDKETHKGVLEKYGRMHVNSAEDGTDVDEVMT VVSGGPFRWGFTLKDGSIARFQVEKVGLNDKAVRVSYHGLGMHAGIMDAKQGLIVAFVHGPQEFTMRYKANVPLPHAKLL GTNPWIDFSGNYPVVLDKVKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28482; Mature: 28482
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSKIALLITAMTSGGVMANDIVTLKFSDARKDVKGIKAVNAVLNPIGVNVTTIEIPEA CCHHHEEEEEEEECCCCEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCHH AKPILRASESRALTKEEHAFLIKEFNLTQEQLLEQIKLAGRTPAVKGGGVLTEETGFGPY HHHHHHCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC PKVYDMLSLDKETHKGVLEKYGRMHVNSAEDGTDVDEVMTVVSGGPFRWGFTLKDGSIAR HHHHHHHHCCCHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEE FQVEKVGLNDKAVRVSYHGLGMHAGIMDAKQGLIVAFVHGPQEFTMRYKANVPLPHAKLL EEEEEECCCCCEEEEEEECCCEECCCCCCCCCEEEEEEECCHHEEEEEECCCCCCCHHEE GTNPWIDFSGNYPVVLDKVKH CCCCCEEECCCCCEEEEECCC >Mature Secondary Structure MKLSKIALLITAMTSGGVMANDIVTLKFSDARKDVKGIKAVNAVLNPIGVNVTTIEIPEA CCHHHEEEEEEEECCCCEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCHH AKPILRASESRALTKEEHAFLIKEFNLTQEQLLEQIKLAGRTPAVKGGGVLTEETGFGPY HHHHHHCCCCCCCCHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC PKVYDMLSLDKETHKGVLEKYGRMHVNSAEDGTDVDEVMTVVSGGPFRWGFTLKDGSIAR HHHHHHHHCCCHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEE FQVEKVGLNDKAVRVSYHGLGMHAGIMDAKQGLIVAFVHGPQEFTMRYKANVPLPHAKLL EEEEEECCCCCEEEEEEECCCEECCCCCCCCCEEEEEEECCHHEEEEEECCCCCCCHHEE GTNPWIDFSGNYPVVLDKVKH CCCCCEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA