| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681297
Identifier: 182681297
GI number: 182681297
Start: 875623
End: 876102
Strand: Reverse
Name: 182681297
Synonym: XfasM23_0743
Alternate gene names: NA
Gene position: 876102-875623 (Counterclockwise)
Preceding gene: 182681299
Following gene: 182681285
Centisome position: 34.55
GC content: 46.67
Gene sequence:
>480_bases ATGAGCGAATCCAATACCGCATCTCATACGATCCATATCAACCTGGAACAATTCTTGCCGTTCCGTATGAGCATGCTATC CAAACACATCAACGATAACATTGCCAAAATTTACGAGCACCGATACAACATTGCTGCCACAGAATGGCAAGTCATTACGA TCTTGGCACTGTATCCTGGTTCTTCAGCAAGTAAAGTCTCTGAGCACAGCGCAATGGACAAAGTGGCAGTAAGCCGCGCA GTAGCGCGCCTACTGAAGCACCACTTCATCCAACGTGAAACTCATGGGGATGACCGACGTCGTTCGATGCTGACTCTCTC TCCCATTGGCCACCAAGTCTATGAAACTGTAGCGCCATTGATTAATGATATGAAAAACAGACTCATGTCGGTTCTTTCCG AAAAGGAGCGCCAACTGCTAGAGCACCTGATTGATCGGCTGATAAAAGAAGGGTTACCGCGAATGATATTACAAGACTAG
Upstream 100 bases:
>100_bases AATGAAAAAAACAGGTATCACGACATCGCACTCACAACAATTCGAAGATGATCGAAGATTTGTGGTTTCATATGAAATCG GAATCAAGGCCTAACGCAGC
Downstream 100 bases:
>100_bases AATTTAATAACATCTCATCATTTTCTCAGTGATAAATATCCAGTCATTTATGAAAACTGAAACTGATATTTACACAAATT TCCAACTCACTTGAAATTGA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; MarR/EmrR Family Transcriptional Regulator; Transcription Regulator Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator Marr Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Transcriptional Regulator MarR/EmrR Family; Transcriptional Regulator MarR/EmrR Family Protein; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSESNTASHTIHINLEQFLPFRMSMLSKHINDNIAKIYEHRYNIAATEWQVITILALYPGSSASKVSEHSAMDKVAVSRA VARLLKHHFIQRETHGDDRRRSMLTLSPIGHQVYETVAPLINDMKNRLMSVLSEKERQLLEHLIDRLIKEGLPRMILQD
Sequences:
>Translated_159_residues MSESNTASHTIHINLEQFLPFRMSMLSKHINDNIAKIYEHRYNIAATEWQVITILALYPGSSASKVSEHSAMDKVAVSRA VARLLKHHFIQRETHGDDRRRSMLTLSPIGHQVYETVAPLINDMKNRLMSVLSEKERQLLEHLIDRLIKEGLPRMILQD >Mature_158_residues SESNTASHTIHINLEQFLPFRMSMLSKHINDNIAKIYEHRYNIAATEWQVITILALYPGSSASKVSEHSAMDKVAVSRAV ARLLKHHFIQRETHGDDRRRSMLTLSPIGHQVYETVAPLINDMKNRLMSVLSEKERQLLEHLIDRLIKEGLPRMILQD
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18337; Mature: 18205
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESNTASHTIHINLEQFLPFRMSMLSKHINDNIAKIYEHRYNIAATEWQVITILALYPG CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHEEEEEEEECCC SSASKVSEHSAMDKVAVSRAVARLLKHHFIQRETHGDDRRRSMLTLSPIGHQVYETVAPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH INDMKNRLMSVLSEKERQLLEHLIDRLIKEGLPRMILQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SESNTASHTIHINLEQFLPFRMSMLSKHINDNIAKIYEHRYNIAATEWQVITILALYPG CCCCCCCEEEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHEEEEEEEECCC SSASKVSEHSAMDKVAVSRAVARLLKHHFIQRETHGDDRRRSMLTLSPIGHQVYETVAPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHH INDMKNRLMSVLSEKERQLLEHLIDRLIKEGLPRMILQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA