Click here to switch to the map view.

The map label for this gene is aau3 [H]

Identifier: 182681285

GI number: 182681285

Start: 859955

End: 860416

Strand: Reverse

Name: aau3 [H]

Synonym: XfasM23_0730

Alternate gene names: 182681285

Gene position: 860416-859955 (Counterclockwise)

Preceding gene: 182681297

Following gene: 182681284

Centisome position: 33.93

GC content: 58.87

Gene sequence:

>462_bases
ATGCTGCGTGTTACCAAACTGACCGACTACGCAAGCGTCGTACTGACCGTACTAGCCGCACACCCCGGCGTGGTCCTCAG
CGCCAACGAACTCGCCGAACACTCTGGTTTGGAACCACCCACCGTAAGCAAAATTCTCAAACCGCTATCGCAAGCTGGCC
TCGTCGCAGGACGGCGCGGCGCTTACGGCGGCTATCGGCTAGCACGCACCCCAGGGGAGATCACCCTGATCCAAATCGTT
GAAGCCATCGAAGGACCATTGGCCATCACCGAATGCAGCCAAGACCACAACCAATGCAGTATCACCCACCAGTGCGGCAT
CCGCTCAAACTGGCAACTGATCAACACCCTGATTGCCCAAGCACTACGCAGCATCACCCTGGCACAAATGCTGGCTCCCC
TCCCCGCTTTTTCTACTCACAGCCAGCCGCGCACCATCGCCGCCAGCATCACAACCACCTGA

Upstream 100 bases:

>100_bases
ACCCAAAGCACATCAATACAACACACACGGAAAGTCGATTGGCGCGCACATCTGGAAAGCGTACAATTTCTGTCCGCTTT
AAACATTCACACACCATTGC

Downstream 100 bases:

>100_bases
CACAAGCAAACGACAGAACCATGGCTACTGACATCGCCACCCCACAGAACGCCGAGATTCTCGAACGCCTGGACAGGCGC
TACGAAGCCGGCTTCGTGAC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLRVTKLTDYASVVLTVLAAHPGVVLSANELAEHSGLEPPTVSKILKPLSQAGLVAGRRGAYGGYRLARTPGEITLIQIV
EAIEGPLAITECSQDHNQCSITHQCGIRSNWQLINTLIAQALRSITLAQMLAPLPAFSTHSQPRTIAASITTT

Sequences:

>Translated_153_residues
MLRVTKLTDYASVVLTVLAAHPGVVLSANELAEHSGLEPPTVSKILKPLSQAGLVAGRRGAYGGYRLARTPGEITLIQIV
EAIEGPLAITECSQDHNQCSITHQCGIRSNWQLINTLIAQALRSITLAQMLAPLPAFSTHSQPRTIAASITTT
>Mature_153_residues
MLRVTKLTDYASVVLTVLAAHPGVVLSANELAEHSGLEPPTVSKILKPLSQAGLVAGRRGAYGGYRLARTPGEITLIQIV
EAIEGPLAITECSQDHNQCSITHQCGIRSNWQLINTLIAQALRSITLAQMLAPLPAFSTHSQPRTIAASITTT

Specific function: Required for growth utilizing PHB cycle intermediates [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16275; Mature: 16275

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVTKLTDYASVVLTVLAAHPGVVLSANELAEHSGLEPPTVSKILKPLSQAGLVAGRRG
CCEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
AYGGYRLARTPGEITLIQIVEAIEGPLAITECSQDHNQCSITHQCGIRSNWQLINTLIAQ
CCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
ALRSITLAQMLAPLPAFSTHSQPRTIAASITTT
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLRVTKLTDYASVVLTVLAAHPGVVLSANELAEHSGLEPPTVSKILKPLSQAGLVAGRRG
CCEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
AYGGYRLARTPGEITLIQIVEAIEGPLAITECSQDHNQCSITHQCGIRSNWQLINTLIAQ
CCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH
ALRSITLAQMLAPLPAFSTHSQPRTIAASITTT
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10735852; 11481430 [H]