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The map label for this gene is yhbH [C]

Identifier: 182681224

GI number: 182681224

Start: 794629

End: 794946

Strand: Reverse

Name: yhbH [C]

Synonym: XfasM23_0669

Alternate gene names: 182681224

Gene position: 794946-794629 (Counterclockwise)

Preceding gene: 182681225

Following gene: 182681223

Centisome position: 31.35

GC content: 47.8

Gene sequence:

>318_bases
ATGCACATCGAAACTTATGGGCAACAGATCGAAGTCACTCCTGCTTTACGGGAGTATGTGGAAACGAAGCTAAAACGCCT
CCAACGCCACTTCAGCCACCACTGCGAAATCCGCACCCAACTGTCCATGAGTAAAATCGACCATCATGTTACCGCTACAA
TCAATATCCCAGGCCGTACTTTGAATGCCAACGCCAGTGCATCAACCATGTACGCAGCCATTGATCTGGTAGCAGACAAA
CTTGATCGATTAATACTCAAGCACAAGGAAAAAAAATGCGACCACCACGCCAAGGAGGTACGCGATCACCTAGAATGA

Upstream 100 bases:

>100_bases
AGTCCTCTGATCTATCTATTTCCGGCGTCTCAGCGCCAAACAGGTGGATCAAACAGGAATAGGATGATTGATTAACGTAA
TAACCAATGGGAGGTATCCG

Downstream 100 bases:

>100_bases
TTGCAACTTGAAGTTACCTACTCCAGATTGATTTGATGGTAATGGTGCTCACCCAGAGTATCCGCGTGATTTAGCTAAAA
AGCGTACTGACAACAGCAAC

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: ORF107 [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MHIETYGQQIEVTPALREYVETKLKRLQRHFSHHCEIRTQLSMSKIDHHVTATINIPGRTLNANASASTMYAAIDLVADK
LDRLILKHKEKKCDHHAKEVRDHLE

Sequences:

>Translated_105_residues
MHIETYGQQIEVTPALREYVETKLKRLQRHFSHHCEIRTQLSMSKIDHHVTATINIPGRTLNANASASTMYAAIDLVADK
LDRLILKHKEKKCDHHAKEVRDHLE
>Mature_105_residues
MHIETYGQQIEVTPALREYVETKLKRLQRHFSHHCEIRTQLSMSKIDHHVTATINIPGRTLNANASASTMYAAIDLVADK
LDRLILKHKEKKCDHHAKEVRDHLE

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=95, Percent_Identity=36.8421052631579, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 12176; Mature: 12176

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIETYGQQIEVTPALREYVETKLKRLQRHFSHHCEIRTQLSMSKIDHHVTATINIPGRT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCE
LNANASASTMYAAIDLVADKLDRLILKHKEKKCDHHAKEVRDHLE
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHIETYGQQIEVTPALREYVETKLKRLQRHFSHHCEIRTQLSMSKIDHHVTATINIPGRT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCE
LNANASASTMYAAIDLVADKLDRLILKHKEKKCDHHAKEVRDHLE
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 3481423 [H]