Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681166
Identifier: 182681166
GI number: 182681166
Start: 719714
End: 720814
Strand: Reverse
Name: 182681166
Synonym: XfasM23_0608
Alternate gene names: NA
Gene position: 720814-719714 (Counterclockwise)
Preceding gene: 182681167
Following gene: 182681165
Centisome position: 28.43
GC content: 50.77
Gene sequence:
>1101_bases ATGGAAAAGCAAAAAGAAAGGACTGTTATCAAGTCCGAAGAGATCAAGTCCGAGGAAGAGGGTTTAAACGCAGACGCTCA AATCGTCGCACTTTCAAAAAGAATCGAGTTTTATCTCACGGAATATTCCGTAGAGCTTTTGGCCAGAAAAATGAACAATG GCGACTTCATCATCCCTGCGTATCAACGCGAGTACACGTGGGATGATCATCGCAAATCGCGCTTTATCGAGTCACTGATC CTGGGCCTTCCCATTCCATTCCTTTTCTTCTGGGAAAGACCGGAGGACGGTACGTTGGAAATCGTGGATGGCTCGCAACG CCTGCGGTCGATCGAAGAATTCCTCTTAGGCAACCTGCAACTTGGTAAATTACAAACCCTCACCGCGTTGTCTGGCTTCA GGTTCTCGGACCTTCCCGAATCCCGGCAAAGGAAAATCAATAATCGATCAATACGCGGAGTTGTACTGAACGAACATGCC GATGAGAAGGCGCGCTTTGACATGTTTGAGCGCATCAATACCGGCAGCAAGATTGCGAACATGGCAGAAATCCGCCGCGG TGCCCTCCCTGGTCCATTCATGACTCTCATCATCGACCTCGCGGAGCTTCCGGAATTTATCGCGCTGACTCCTGTGTCCC AAAAGAATTTTAAGGAACGCGAGCACGAGGAACTTGTCTCGCGGTTTTTTGCCTACAGCGATGGACTAGATGAGTATAAG GACCGCCCCTCGACGTTCATCTTCAACTACATCAAGACGATGAACGACAAGGCAGCCCAAGATGAGACGTTGACCGAGCG TTACCGTAAGCAATTTGAGGAGGTGATCGACTTCGTCGCTCGCGTCTTCCCACATGGATTCAGCAAAATTCCCAAAGGCA AGGCCACACCGAGAACGAGGTTCGAAGCCATTGCAGTCGGATCACGCCTGGCATTGAATAAGCGCCCTAGTCTGGCCAAC GCCACCCCACCCAGCGTCACCACATGGTTAACCAGTAAGGAGTTCACAGAAATCCTCCGTTCAGACGGTGCCAATGCGAT CACCCTGCTGCGGAAACGCACGGAGTTCGTACGCAATCAACTGCTGCGAGAAAGTAAATGA
Upstream 100 bases:
>100_bases TCTAACAAACGTGAAACGCTGTCAGCCCAGATGCTATTCACCTGCCCCCCGCTGTGAGCGCATCAAGACAACACACCAAG CAATCATCGAACGGCACGCC
Downstream 100 bases:
>100_bases GCAGCAAACTAAGGATTGCATTCCAAGAACGACTCGAAGAAGTGAATGCCTATCTTGAGTTGCTGACGGTGATGGATGCT CAAGCACAACAAGGGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MEKQKERTVIKSEEIKSEEEGLNADAQIVALSKRIEFYLTEYSVELLARKMNNGDFIIPAYQREYTWDDHRKSRFIESLI LGLPIPFLFFWERPEDGTLEIVDGSQRLRSIEEFLLGNLQLGKLQTLTALSGFRFSDLPESRQRKINNRSIRGVVLNEHA DEKARFDMFERINTGSKIANMAEIRRGALPGPFMTLIIDLAELPEFIALTPVSQKNFKEREHEELVSRFFAYSDGLDEYK DRPSTFIFNYIKTMNDKAAQDETLTERYRKQFEEVIDFVARVFPHGFSKIPKGKATPRTRFEAIAVGSRLALNKRPSLAN ATPPSVTTWLTSKEFTEILRSDGANAITLLRKRTEFVRNQLLRESK
Sequences:
>Translated_366_residues MEKQKERTVIKSEEIKSEEEGLNADAQIVALSKRIEFYLTEYSVELLARKMNNGDFIIPAYQREYTWDDHRKSRFIESLI LGLPIPFLFFWERPEDGTLEIVDGSQRLRSIEEFLLGNLQLGKLQTLTALSGFRFSDLPESRQRKINNRSIRGVVLNEHA DEKARFDMFERINTGSKIANMAEIRRGALPGPFMTLIIDLAELPEFIALTPVSQKNFKEREHEELVSRFFAYSDGLDEYK DRPSTFIFNYIKTMNDKAAQDETLTERYRKQFEEVIDFVARVFPHGFSKIPKGKATPRTRFEAIAVGSRLALNKRPSLAN ATPPSVTTWLTSKEFTEILRSDGANAITLLRKRTEFVRNQLLRESK >Mature_366_residues MEKQKERTVIKSEEIKSEEEGLNADAQIVALSKRIEFYLTEYSVELLARKMNNGDFIIPAYQREYTWDDHRKSRFIESLI LGLPIPFLFFWERPEDGTLEIVDGSQRLRSIEEFLLGNLQLGKLQTLTALSGFRFSDLPESRQRKINNRSIRGVVLNEHA DEKARFDMFERINTGSKIANMAEIRRGALPGPFMTLIIDLAELPEFIALTPVSQKNFKEREHEELVSRFFAYSDGLDEYK DRPSTFIFNYIKTMNDKAAQDETLTERYRKQFEEVIDFVARVFPHGFSKIPKGKATPRTRFEAIAVGSRLALNKRPSLAN ATPPSVTTWLTSKEFTEILRSDGANAITLLRKRTEFVRNQLLRESK
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42358; Mature: 42358
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQKERTVIKSEEIKSEEEGLNADAQIVALSKRIEFYLTEYSVELLARKMNNGDFIIPA CCCHHHHHHHHHHHHCCHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC YQREYTWDDHRKSRFIESLILGLPIPFLFFWERPEDGTLEIVDGSQRLRSIEEFLLGNLQ CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCC LGKLQTLTALSGFRFSDLPESRQRKINNRSIRGVVLNEHADEKARFDMFERINTGSKIAN CCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHH MAEIRRGALPGPFMTLIIDLAELPEFIALTPVSQKNFKEREHEELVSRFFAYSDGLDEYK HHHHHHCCCCCHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH DRPSTFIFNYIKTMNDKAAQDETLTERYRKQFEEVIDFVARVFPHGFSKIPKGKATPRTR CCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH FEAIAVGSRLALNKRPSLANATPPSVTTWLTSKEFTEILRSDGANAITLLRKRTEFVRNQ HHHHHHCCHHCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLRESK HHHCCC >Mature Secondary Structure MEKQKERTVIKSEEIKSEEEGLNADAQIVALSKRIEFYLTEYSVELLARKMNNGDFIIPA CCCHHHHHHHHHHHHCCHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC YQREYTWDDHRKSRFIESLILGLPIPFLFFWERPEDGTLEIVDGSQRLRSIEEFLLGNLQ CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCC LGKLQTLTALSGFRFSDLPESRQRKINNRSIRGVVLNEHADEKARFDMFERINTGSKIAN CCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHH MAEIRRGALPGPFMTLIIDLAELPEFIALTPVSQKNFKEREHEELVSRFFAYSDGLDEYK HHHHHHCCCCCHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH DRPSTFIFNYIKTMNDKAAQDETLTERYRKQFEEVIDFVARVFPHGFSKIPKGKATPRTR CCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHH FEAIAVGSRLALNKRPSLANATPPSVTTWLTSKEFTEILRSDGANAITLLRKRTEFVRNQ HHHHHHCCHHCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLRESK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA