Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681165
Identifier: 182681165
GI number: 182681165
Start: 718980
End: 719717
Strand: Reverse
Name: 182681165
Synonym: XfasM23_0607
Alternate gene names: NA
Gene position: 719717-718980 (Counterclockwise)
Preceding gene: 182681166
Following gene: 182681164
Centisome position: 28.38
GC content: 49.46
Gene sequence:
>738_bases ATGAGCAGCAAACTAAGGATTGCATTCCAAGAACGACTCGAAGAAGTGAATGCCTATCTTGAGTTGCTGACGGTGATGGA TGCTCAAGCACAACAAGGGCAACCACGCATCAAAGGCGCAGCAGATCCTATTACCCCCCAACAACAAAAAATCCTTTATT CAAGCGTGTATCTGCAGTTGTACAACCTTGTCGAGGCCACCATTTCTCACTGTATTAAAGCCGTTGCGGAGGCTGTCAAA GGAAATGCGCAATGCACACCTAAGCAACTGAATGATGCAATGCGGCGTGAGTGGGTACGCGTGGTCGCTCGCACGCATAC TACATTGGAACCAAACAAGAGACTGGATAGCGCGTTGCAGCTTTGCAATCATCTGTTGGCTGCATCACCCATTGATACCT TCACGATTGAAAAGGCCAACGCTGGCAATTGGGATGACCGTGAGATCGAAAATGTCATTGAACGAGTGGGCCTGGAATTG AAGATAAACAAGCGCGTCTATCAAGCCATCAAGCAGCCTTTTCGGAATGACCTAGGGCCACTGGCCTTTGTGAAACAACT CAGGAATGATCTGGCGCACGGCTCCATATCATTTGCAGAGTGCGCCGCGGAGATCACTGTCAAAGAACTGGTGGCACTCA AGGAGAAGACCGTTGATTACCTTGACGACGTGGTGGACCACTTCGCCAGATACATTGATCGCTTTGAATATCTTGCCCCG GAGAAGCGTCCTGCATGA
Upstream 100 bases:
>100_bases AGGAGTTCACAGAAATCCTCCGTTCAGACGGTGCCAATGCGATCACCCTGCTGCGGAAACGCACGGAGTTCGTACGCAAT CAACTGCTGCGAGAAAGTAA
Downstream 100 bases:
>100_bases GCCGTCATCCACGACGCCCCAAGAACATCCCCAACATTGTGGGCGTTGATCTTTTCTGCGGTGTGGGCGGCTTAACCCAT GGCCTGGCTCGCGGTGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSSKLRIAFQERLEEVNAYLELLTVMDAQAQQGQPRIKGAADPITPQQQKILYSSVYLQLYNLVEATISHCIKAVAEAVK GNAQCTPKQLNDAMRREWVRVVARTHTTLEPNKRLDSALQLCNHLLAASPIDTFTIEKANAGNWDDREIENVIERVGLEL KINKRVYQAIKQPFRNDLGPLAFVKQLRNDLAHGSISFAECAAEITVKELVALKEKTVDYLDDVVDHFARYIDRFEYLAP EKRPA
Sequences:
>Translated_245_residues MSSKLRIAFQERLEEVNAYLELLTVMDAQAQQGQPRIKGAADPITPQQQKILYSSVYLQLYNLVEATISHCIKAVAEAVK GNAQCTPKQLNDAMRREWVRVVARTHTTLEPNKRLDSALQLCNHLLAASPIDTFTIEKANAGNWDDREIENVIERVGLEL KINKRVYQAIKQPFRNDLGPLAFVKQLRNDLAHGSISFAECAAEITVKELVALKEKTVDYLDDVVDHFARYIDRFEYLAP EKRPA >Mature_244_residues SSKLRIAFQERLEEVNAYLELLTVMDAQAQQGQPRIKGAADPITPQQQKILYSSVYLQLYNLVEATISHCIKAVAEAVKG NAQCTPKQLNDAMRREWVRVVARTHTTLEPNKRLDSALQLCNHLLAASPIDTFTIEKANAGNWDDREIENVIERVGLELK INKRVYQAIKQPFRNDLGPLAFVKQLRNDLAHGSISFAECAAEITVKELVALKEKTVDYLDDVVDHFARYIDRFEYLAPE KRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27804; Mature: 27673
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKLRIAFQERLEEVNAYLELLTVMDAQAQQGQPRIKGAADPITPQQQKILYSSVYLQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YNLVEATISHCIKAVAEAVKGNAQCTPKQLNDAMRREWVRVVARTHTTLEPNKRLDSALQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LCNHLLAASPIDTFTIEKANAGNWDDREIENVIERVGLELKINKRVYQAIKQPFRNDLGP HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCH LAFVKQLRNDLAHGSISFAECAAEITVKELVALKEKTVDYLDDVVDHFARYIDRFEYLAP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKRPA CCCCC >Mature Secondary Structure SSKLRIAFQERLEEVNAYLELLTVMDAQAQQGQPRIKGAADPITPQQQKILYSSVYLQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YNLVEATISHCIKAVAEAVKGNAQCTPKQLNDAMRREWVRVVARTHTTLEPNKRLDSALQ HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LCNHLLAASPIDTFTIEKANAGNWDDREIENVIERVGLELKINKRVYQAIKQPFRNDLGP HHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCH LAFVKQLRNDLAHGSISFAECAAEITVKELVALKEKTVDYLDDVVDHFARYIDRFEYLAP HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKRPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA