Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ygfY [C]
Identifier: 182680908
GI number: 182680908
Start: 444143
End: 444391
Strand: Direct
Name: ygfY [C]
Synonym: XfasM23_0346
Alternate gene names: 182680908
Gene position: 444143-444391 (Clockwise)
Preceding gene: 182680907
Following gene: 182680909
Centisome position: 17.52
GC content: 52.61
Gene sequence:
>249_bases ATGGATAAACCGGCTGAATTGAACAAACTACGTTGGCGTAGCCGACGTGGGATGCGTGAATTGGATCACCTGTTTGATCG CTATCTCTCACATTGCTGGGCGCAAGCGTCTGAGGCGGAGCGCGGTGTTTTCCTACGCTTTTTGGATTGTGAGGACGATA AATTGTGGCGTTGGTTGATGGGGTACGAGGTTTGTCAGGATGCGTCGTTTGCCGCTCTCATCGTTACCATGCGGGCCTTG CCTGCTTGA
Upstream 100 bases:
>100_bases ATGCATTAGTCACCAAACGAAGGTAGTGCTGGTATTAAATTGACGCCTCTGCTGCTTGCGCTATTGCCGATGCCAGCGTG CTACTGCCGAGGAACCTACG
Downstream 100 bases:
>100_bases GTGGTCACCGTCTCGATGGCTGTTGGTTGCGTTGTTTGCTTTGACGCTACTGGCTTGCGTTGCGCTGCTACGGTGTGACT TAAATCTTACCTTGCGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MDKPAELNKLRWRSRRGMRELDHLFDRYLSHCWAQASEAERGVFLRFLDCEDDKLWRWLMGYEVCQDASFAALIVTMRAL PA
Sequences:
>Translated_82_residues MDKPAELNKLRWRSRRGMRELDHLFDRYLSHCWAQASEAERGVFLRFLDCEDDKLWRWLMGYEVCQDASFAALIVTMRAL PA >Mature_82_residues MDKPAELNKLRWRSRRGMRELDHLFDRYLSHCWAQASEAERGVFLRFLDCEDDKLWRWLMGYEVCQDASFAALIVTMRAL PA
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0350 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005631 [H]
Pfam domain/function: PF03937 DUF339 [H]
EC number: NA
Molecular weight: Translated: 9793; Mature: 9793
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPAELNKLRWRSRRGMRELDHLFDRYLSHCWAQASEAERGVFLRFLDCEDDKLWRWLM CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH GYEVCQDASFAALIVTMRALPA HHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDKPAELNKLRWRSRRGMRELDHLFDRYLSHCWAQASEAERGVFLRFLDCEDDKLWRWLM CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH GYEVCQDASFAALIVTMRALPA HHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]