Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680909
Identifier: 182680909
GI number: 182680909
Start: 444414
End: 444794
Strand: Direct
Name: 182680909
Synonym: XfasM23_0347
Alternate gene names: NA
Gene position: 444414-444794 (Clockwise)
Preceding gene: 182680908
Following gene: 182680910
Centisome position: 17.53
GC content: 54.33
Gene sequence:
>381_bases TTGGTTGCGTTGTTTGCTTTGACGCTACTGGCTTGCGTTGCGCTGCTACGGTGTGACTTAAATCTTACCTTGCGTTGGAG CGGTGTTCTATTGGCCGCCTGCGGTGGTGCTTGGGAGCTGCGCCGTGTTGTTTGTCACCCTTGTTGTGTCTTGCTGATTC CTTCTGGCGATGAGCCACCTTTGTTCAACCAGATGCCGGTTAAAGAATTGCACGTCTCCTGGTACGGCCCGTTGGTGACG GTTTCTTGGCGTGTTCCGGATAGCTGCCGTATGTATCTGTTGTTTTGGCCTGATACATTGTCGGTAGCCATGCGGCGTCA GTTGCGTCTGGTCATGCAAGCGCGTCAGCTTTCGTCCCAGGTGCCGTCAATGGCACCATAG
Upstream 100 bases:
>100_bases TGGTTGATGGGGTACGAGGTTTGTCAGGATGCGTCGTTTGCCGCTCTCATCGTTACCATGCGGGCCTTGCCTGCTTGAGT GGTCACCGTCTCGATGGCTG
Downstream 100 bases:
>100_bases CCGCTTCACTATCAGTTGGGTCTCAATGTTTAATCCGCTTTCTGTTGCGATCGGTTTGCGTTATCTGCGTGCCAAGCGGC GCAATGGTTTCATCTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MVALFALTLLACVALLRCDLNLTLRWSGVLLAACGGAWELRRVVCHPCCVLLIPSGDEPPLFNQMPVKELHVSWYGPLVT VSWRVPDSCRMYLLFWPDTLSVAMRRQLRLVMQARQLSSQVPSMAP
Sequences:
>Translated_126_residues MVALFALTLLACVALLRCDLNLTLRWSGVLLAACGGAWELRRVVCHPCCVLLIPSGDEPPLFNQMPVKELHVSWYGPLVT VSWRVPDSCRMYLLFWPDTLSVAMRRQLRLVMQARQLSSQVPSMAP >Mature_126_residues MVALFALTLLACVALLRCDLNLTLRWSGVLLAACGGAWELRRVVCHPCCVLLIPSGDEPPLFNQMPVKELHVSWYGPLVT VSWRVPDSCRMYLLFWPDTLSVAMRRQLRLVMQARQLSSQVPSMAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14166; Mature: 14166
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALFALTLLACVALLRCDLNLTLRWSGVLLAACGGAWELRRVVCHPCCVLLIPSGDEPP CHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHHHHHHHCCEEEEEEECCCCCC LFNQMPVKELHVSWYGPLVTVSWRVPDSCRMYLLFWPDTLSVAMRRQLRLVMQARQLSSQ CCCCCCHHHHEEEEECCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC VPSMAP CCCCCC >Mature Secondary Structure MVALFALTLLACVALLRCDLNLTLRWSGVLLAACGGAWELRRVVCHPCCVLLIPSGDEPP CHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHHHHHHHCCEEEEEEECCCCCC LFNQMPVKELHVSWYGPLVTVSWRVPDSCRMYLLFWPDTLSVAMRRQLRLVMQARQLSSQ CCCCCCHHHHEEEEECCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC VPSMAP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA