Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is pgl [H]
Identifier: 182680898
GI number: 182680898
Start: 434522
End: 435241
Strand: Reverse
Name: pgl [H]
Synonym: XfasM23_0336
Alternate gene names: 182680898
Gene position: 435241-434522 (Counterclockwise)
Preceding gene: 182680899
Following gene: 182680897
Centisome position: 17.16
GC content: 57.22
Gene sequence:
>720_bases ATGATCCCTACAAACGACGCACACATCACCTTGATGAACTACGACGACCCGCTGGAGTGGGCACAGAGTGTCACCAGAGA ATTGGAGAACATCCTCCTCCAAGAGATCACCCAACGTGGCCGCGCCTCCCTGCTCCTCTCTGGTGGCACCACACCGGCAC TCGTCTACGAAACCCTCGCCACACGGCCCCTAGACTGGTCCAAGATCGACATTGGCTTAGTCGACGAACGCTGGCTATCA CCGCAAGACAAAGACAGTAACGCTTGGCTGGTACGACACACACTTCTGGAACACGCCAAGCACGCCACCTTCCTGCCCCT GATACGACCAGGCAAAACACTGAACCAATGCGTCCATGACGCCAACCTTCAGATCACCCATAGCCCCCCACCTTGCGCCG TAGTGCTGGGCATGGGCAATGACGGCCACACCGCATCACTGTTTCCAGGCTCATTGGATCTCCAAAAAGCAATAAACACT CCCCAACCCTACGTAGCACTCGATGCCACCGGCTGCCCCGGCGCCGGCGTCTGGCCACTGCGTATCACCCTCACTCCAGC CGGACTCAACAACATTCCACACCGTCTCCTGCTGCTACGCGGAAAACAGAAACTGAAAGTTCTGGAAACAGCACTCTCCT GCAAAGATGCACTGGACTATCCGATAAGGACCGCGATCGACCTACCAAATGCGCGCCTCCGCGTGCACTGGTGCGCTTAA
Upstream 100 bases:
>100_bases CCCGTATCCCCTCTTTGGCAGTGATCCATCCACACCCTGGCCTACTCGGCGCAGCCGCATACGCACGAGACACCGAGCAA GTCCCGCAGGAAATCAAGGC
Downstream 100 bases:
>100_bases CCAAGCCCTCGCAAAAAGCGCTACATCCATCGTGGAAGAATACAAACCCTCGCAACAGATCCCACACCCTATCACTGGCC TGCAATGAGAGAGCAAAGTC
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MIPTNDAHITLMNYDDPLEWAQSVTRELENILLQEITQRGRASLLLSGGTTPALVYETLATRPLDWSKIDIGLVDERWLS PQDKDSNAWLVRHTLLEHAKHATFLPLIRPGKTLNQCVHDANLQITHSPPPCAVVLGMGNDGHTASLFPGSLDLQKAINT PQPYVALDATGCPGAGVWPLRITLTPAGLNNIPHRLLLLRGKQKLKVLETALSCKDALDYPIRTAIDLPNARLRVHWCA
Sequences:
>Translated_239_residues MIPTNDAHITLMNYDDPLEWAQSVTRELENILLQEITQRGRASLLLSGGTTPALVYETLATRPLDWSKIDIGLVDERWLS PQDKDSNAWLVRHTLLEHAKHATFLPLIRPGKTLNQCVHDANLQITHSPPPCAVVLGMGNDGHTASLFPGSLDLQKAINT PQPYVALDATGCPGAGVWPLRITLTPAGLNNIPHRLLLLRGKQKLKVLETALSCKDALDYPIRTAIDLPNARLRVHWCA >Mature_239_residues MIPTNDAHITLMNYDDPLEWAQSVTRELENILLQEITQRGRASLLLSGGTTPALVYETLATRPLDWSKIDIGLVDERWLS PQDKDSNAWLVRHTLLEHAKHATFLPLIRPGKTLNQCVHDANLQITHSPPPCAVVLGMGNDGHTASLFPGSLDLQKAINT PQPYVALDATGCPGAGVWPLRITLTPAGLNNIPHRLLLLRGKQKLKVLETALSCKDALDYPIRTAIDLPNARLRVHWCA
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26368; Mature: 26368
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTNDAHITLMNYDDPLEWAQSVTRELENILLQEITQRGRASLLLSGGTTPALVYETLA CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH TRPLDWSKIDIGLVDERWLSPQDKDSNAWLVRHTLLEHAKHATFLPLIRPGKTLNQCVHD CCCCCCCEEEEEEECHHHCCCCCCCCCEEHHHHHHHHHHCCCEECEEECCCHHHHHHHHC ANLQITHSPPPCAVVLGMGNDGHTASLFPGSLDLQKAINTPQPYVALDATGCPGAGVWPL CCEEEECCCCCEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEE RITLTPAGLNNIPHRLLLLRGKQKLKVLETALSCKDALDYPIRTAIDLPNARLRVHWCA EEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEC >Mature Secondary Structure MIPTNDAHITLMNYDDPLEWAQSVTRELENILLQEITQRGRASLLLSGGTTPALVYETLA CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH TRPLDWSKIDIGLVDERWLSPQDKDSNAWLVRHTLLEHAKHATFLPLIRPGKTLNQCVHD CCCCCCCEEEEEEECHHHCCCCCCCCCEEHHHHHHHHHHCCCEECEEECCCHHHHHHHHC ANLQITHSPPPCAVVLGMGNDGHTASLFPGSLDLQKAINTPQPYVALDATGCPGAGVWPL CCEEEECCCCCEEEEEECCCCCCEEEECCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEE RITLTPAGLNNIPHRLLLLRGKQKLKVLETALSCKDALDYPIRTAIDLPNARLRVHWCA EEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]