Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is coaD
Identifier: 182680833
GI number: 182680833
Start: 351685
End: 352173
Strand: Direct
Name: coaD
Synonym: XfasM23_0268
Alternate gene names: 182680833
Gene position: 351685-352173 (Clockwise)
Preceding gene: 182680832
Following gene: 182680834
Centisome position: 13.87
GC content: 54.19
Gene sequence:
>489_bases ATGAGCGTGGTTAATCGCCGCATCGCCGTCTATCCTGGCACCTTCGATCCGATCACTAATGGTCACATTGATTTAGTGAG TCGTGCTGCTCCGCTGTTTGAGTCGGTTGTGGTTGGTGTTGCGCAGAGTCCATCCAAGGGACCTTCTCTGCCGTTGCAGC AGCGTGTGACTCTGGCGCGTGAGGCGTTGTGCCAGCATGAAAATGTGCAGGTCATTGGGTTCGATACATTGTTAGCGCAT TTTGTGCGTCACGTTGGCGCGGGTGTGTTGCTGCGCGGCTTGCGTGCGGTTTCGGATTTCGAGTATGAGTTCCAGATGGC GAGTATGAATCGTCATCTGATCCCTGAAGTTGAGACATTGTTTCTGACTCCGGCGGAGCAGCATAGTTTTATTTCGTCTT CGCTGGTGCGTGAGATTGCGCGGCTTGGCGGAGATGTTTCCGGCTTTGCACCTGCGGCGGTCGTTGCGGCGTTACGTCAG AATCTTTAG
Upstream 100 bases:
>100_bases GGGAGTTGCATCGTGACGGTCGCACGCGTGAGGTGTGCTATGCGTTGTATCGGTATCCGGCTGTTACACTGCCTGTTGGT TCTAAGTCAGTATCGTCTGT
Downstream 100 bases:
>100_bases GGGTACACGATGTTTTTCTGTTTTATCCATAATCTGTAAGGCAAGAGCAATGAATAACATGTTGCGTGTGGTGGTGGTTG CTTTGTTTGTTTTTGTTTTG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSVVNRRIAVYPGTFDPITNGHIDLVSRAAPLFESVVVGVAQSPSKGPSLPLQQRVTLAREALCQHENVQVIGFDTLLAH FVRHVGAGVLLRGLRAVSDFEYEFQMASMNRHLIPEVETLFLTPAEQHSFISSSLVREIARLGGDVSGFAPAAVVAALRQ NL
Sequences:
>Translated_162_residues MSVVNRRIAVYPGTFDPITNGHIDLVSRAAPLFESVVVGVAQSPSKGPSLPLQQRVTLAREALCQHENVQVIGFDTLLAH FVRHVGAGVLLRGLRAVSDFEYEFQMASMNRHLIPEVETLFLTPAEQHSFISSSLVREIARLGGDVSGFAPAAVVAALRQ NL >Mature_161_residues SVVNRRIAVYPGTFDPITNGHIDLVSRAAPLFESVVVGVAQSPSKGPSLPLQQRVTLAREALCQHENVQVIGFDTLLAHF VRHVGAGVLLRGLRAVSDFEYEFQMASMNRHLIPEVETLFLTPAEQHSFISSSLVREIARLGGDVSGFAPAAVVAALRQN L
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=157, Percent_Identity=56.0509554140127, Blast_Score=188, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_XYLF2 (B2I7J1)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001828993.1 - ProteinModelPortal: B2I7J1 - SMR: B2I7J1 - GeneID: 6203735 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0268 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17584; Mature: 17453
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVNRRIAVYPGTFDPITNGHIDLVSRAAPLFESVVVGVAQSPSKGPSLPLQQRVTLAR CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH EALCQHENVQVIGFDTLLAHFVRHVGAGVLLRGLRAVSDFEYEFQMASMNRHLIPEVETL HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHE FLTPAEQHSFISSSLVREIARLGGDVSGFAPAAVVAALRQNL EECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SVVNRRIAVYPGTFDPITNGHIDLVSRAAPLFESVVVGVAQSPSKGPSLPLQQRVTLAR CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH EALCQHENVQVIGFDTLLAHFVRHVGAGVLLRGLRAVSDFEYEFQMASMNRHLIPEVETL HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHE FLTPAEQHSFISSSLVREIARLGGDVSGFAPAAVVAALRQNL EECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA