Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680834
Identifier: 182680834
GI number: 182680834
Start: 352223
End: 352717
Strand: Direct
Name: 182680834
Synonym: XfasM23_0269
Alternate gene names: NA
Gene position: 352223-352717 (Clockwise)
Preceding gene: 182680833
Following gene: 182680835
Centisome position: 13.89
GC content: 50.91
Gene sequence:
>495_bases ATGAATAACATGTTGCGTGTGGTGGTGGTTGCTTTGTTTGTTTTTGTTTTGGCCGCTTGTGGTCAGAAAGCAGCTCAAAC GGTGGCGGATGTTGCTTCTTCAGTGCCGACTGTTCCGGCGAAGGATGATGATGCTGCTTGGAAGACGTATCTTGGCCAGG TTGTTTCCAATCACTTGGGCAATAGTACCGGTAGTCCGTTTTTGTACTATTTGCCGCCGGCGTCTGATCCTGATTTCAAA GGAAAGTATGATCGCCAATTAGAGAATGTCACGAGTGCGTTGGGGCGTGGGGTGCAGCCGGGGATGCTGGTGGTGTTTGG TTCTTCGGCGTCGGCCAAGATGGCCGATTTGATTGTGGCTGCGTTCAATAAGGTGCAGGCCGGTTCGATGAAGGGAGTGC ATGTGCTTTTCATTGGGATGAGTGCTGACAATGCTCGCGTGCAAAAAGTGGTGCAGCCCAGTGGGGCTGAGTATGTTTTT GTCGAAGCAAAATGA
Upstream 100 bases:
>100_bases TCCGGCTTTGCACCTGCGGCGGTCGTTGCGGCGTTACGTCAGAATCTTTAGGGGTACACGATGTTTTTCTGTTTTATCCA TAATCTGTAAGGCAAGAGCA
Downstream 100 bases:
>100_bases GGCAGCAGGTGTTGCTGGGAGCAGGCAGATGCGTGCTTGCGTCTTTATGAATATCCCCGTCATGGGCGTTAGCTTCGATG GCTTGTTTGCTGGGATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MNNMLRVVVVALFVFVLAACGQKAAQTVADVASSVPTVPAKDDDAAWKTYLGQVVSNHLGNSTGSPFLYYLPPASDPDFK GKYDRQLENVTSALGRGVQPGMLVVFGSSASAKMADLIVAAFNKVQAGSMKGVHVLFIGMSADNARVQKVVQPSGAEYVF VEAK
Sequences:
>Translated_164_residues MNNMLRVVVVALFVFVLAACGQKAAQTVADVASSVPTVPAKDDDAAWKTYLGQVVSNHLGNSTGSPFLYYLPPASDPDFK GKYDRQLENVTSALGRGVQPGMLVVFGSSASAKMADLIVAAFNKVQAGSMKGVHVLFIGMSADNARVQKVVQPSGAEYVF VEAK >Mature_164_residues MNNMLRVVVVALFVFVLAACGQKAAQTVADVASSVPTVPAKDDDAAWKTYLGQVVSNHLGNSTGSPFLYYLPPASDPDFK GKYDRQLENVTSALGRGVQPGMLVVFGSSASAKMADLIVAAFNKVQAGSMKGVHVLFIGMSADNARVQKVVQPSGAEYVF VEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17298; Mature: 17298
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNMLRVVVVALFVFVLAACGQKAAQTVADVASSVPTVPAKDDDAAWKTYLGQVVSNHLG CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC NSTGSPFLYYLPPASDPDFKGKYDRQLENVTSALGRGVQPGMLVVFGSSASAKMADLIVA CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH AFNKVQAGSMKGVHVLFIGMSADNARVQKVVQPSGAEYVFVEAK HHHHHCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MNNMLRVVVVALFVFVLAACGQKAAQTVADVASSVPTVPAKDDDAAWKTYLGQVVSNHLG CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC NSTGSPFLYYLPPASDPDFKGKYDRQLENVTSALGRGVQPGMLVVFGSSASAKMADLIVA CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHH AFNKVQAGSMKGVHVLFIGMSADNARVQKVVQPSGAEYVFVEAK HHHHHCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA