Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is maeB [H]
Identifier: 182680830
GI number: 182680830
Start: 346452
End: 348746
Strand: Direct
Name: maeB [H]
Synonym: XfasM23_0265
Alternate gene names: 182680830
Gene position: 346452-348746 (Clockwise)
Preceding gene: 182680829
Following gene: 182680832
Centisome position: 13.66
GC content: 54.2
Gene sequence:
>2295_bases ATGTCAAACGATACATTTAAACAGGCGGCGATTGATTATCACCGCACGCAGCCAGCCGGTAAGATCAAGGTGGTCGCAAC CAAGCCAATGCTGACGCAGCGTGATTTGTCGTTGGCGTATTCCCCAGGTGTGGCGTTTGCTTGCCAAGCGATTGTCGAAA ATCCTCAGCAGGCAAGTGAGCTCACGGCGCGCGGTAACTTGGTTGCGGTGATTTCCAACGGCACTGCGGTGTTGGGTTTG GGGAACATTGGTCCACTGGCGGGTAAGCCGGTGATGGAAGGCAAGGGCGTGCTGTTTCAGAAGTTCGCTGGCATTGATGT GTTTGATATCGAGATTGACGAGTCTGACCCGGATAAGTTGGTAGACATTATTGCCAGTCTGGAGCCGACTTTCGGTGGTG TGAACTTAGAGGACATCAAAGCCCCGGAATGTTTCATCGTCGAGCGTAAGTTGCGTGAGCGGATGAGTATTCCGGTCTTT CACGATGATCAGCACGGTACTGCGATCATTGTCGGTGCGGCTGTGCTTAACGCGATGGTCATCACTGGAAAGAAGATCGG AGAGGTGAAGTTGGCAACCACCGGCATGGGAGCGGCGGGTGTCTCCTGCGTCAATATGCTGGTTTCGCTGGGGTTGAACC CGGATAACATTCTGGCTTATGACCGGGAGGGGGTGATCCATACTGGCCGTACCGATTTGGATCCGGAGAAGCAGCGTTAT GCACGGGATACGGATAAGCGCACTTTGGCGGAGATTGTGGAGGGTGCGGATATTTTTCTTGGGCTTTCTGCTGCTGGCAT CTTGACGCCAGAGATGGTGGCGACGATGGCGCCTGACCCAGTGATCTTTGCCTTGGCCAATCCCATTCCGGAGATCATGC CTGAGGTGGTATGTGCGGTGCGTACGGATGCCATTATTGGAACTGGGCGTTCGGATTATCCAAATCAAATCAACAATGTT TTGTGTTTTCCCTACTTGTTCCGTGGTGCGTTGGATGTGGGTGCGACCACGATCAATGAGGAGATGAAGATTGCTTGCGT TAAGGCGATTGCTGCGTTAGCACGGTGTGAGGCTTCCGATCTGGGCGCTGCTTACGGTGGTGAGACGCCAAGTTTTGGCC GGGAGTATTTGATTCCGCGTCCGCTTGACCCACGTTTATTAGTGGAACTGTCTTCGGCGGTGGCGCAGGCGGCGATGGAT TCTGGGGTGGCGACTCGCCCGATTACGGATATGAGCGCCTACCATGACAAGTTGAGCCAATTTGTTTACCGCACCAGCTT GATGATGAAGCCGGTTTACGATCGTGCGCGTGCTGATAAGCAGCGGGTGGTGTATGCCGAGGGTGAGGAAGAGGTGATTC TGCGTGCGGTGCAGAATGTGATTGACGAAGGGTTGGCGTTCCCGATTCTGATTGGTCGTCCGGATGTGATCGAAAGCAGG ATTCAGCGCATGGGGCTGCGCATGAAGGTTGGTGTCGATTTCGAGGTGACCAATATCCACGATGATCCTCGCTTCAACGA TTATTGGCAGTACTACCATGGGGTGACGGAGCGTCGTGGGGTGACGGTCAGTGCGGCGAAGGAGTTAATGCGTTCGCGTC CTACTCTGATTGCCTCGGTGATGGTTGCACGTGGTGAGGCCGATGCGTTGTTGACTGGAGCCGTCGGTCGTTTCCATAAG AGGCTCGGTTATGCGCGCAGTGTGATCCCTCTGGAACCTCGGGTGAGTTCAACGGCGGCGATGACAGGCGTGATTAACCA ACATGGTGCGTTTTTCTTTGTGGATACCCATGTGCAGGAAGATCCGAGCGCCGAGCAGATTACCGAGGCCACGTTGCAGG CGTGTTACCGCTTGAGGTTGTTTGGCATTGAGCCGAGTGTGGCGTTACTGTCGCACAGTAATTTTGGTAGTCACGATTCG CGTGATGCATTGAAGATGCGCCAGGTGCGTGAGCTGCTGCTCAAGCGTAGCCCCAGGTTGAATATTGATGGGGAGATGCA GGCGGATACAGCGTGGGATGAGGTGCTGCGCGAGCGCATTATGCCCAATACAACGTTGAAAGGTCGGGCTAATCTGTTTG TGTTTCCAAATTTGGAGGCGGCCAATATTGCTTACAACTTGGTGCGTGTGTTTACCGATGGTGTGGCGATTGGCCCGATT TTGATGGGTATTTCCAAGGCAGTGCATATTTTGACGAGTAGCACCACGTCACGGCGGGTGATGAATATGACGGCAATCGC TGCGGTGGATGCGCAGATTCGCAAGCAGTTTGAAGGCGGGAAGCGCGGGGGATAA
Upstream 100 bases:
>100_bases GCCGTATTTAGCATCGGCTGTCACTGTTGCGTGACAGGTCTCGTCATTGGTATGTAGTTAGAGTGGGCTCTTCCTACGCC TATTTAGGTATTCAAGCGCG
Downstream 100 bases:
>100_bases ATGAAACGACGCCGGGTGTGATGCAGCGTGCTGAGGCATTGATGTTTTTTTGAGTGTATTTGAGGAACGTTTTTGTTCCT CCACTCAGCAGCGTTTGTTT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MSNDTFKQAAIDYHRTQPAGKIKVVATKPMLTQRDLSLAYSPGVAFACQAIVENPQQASELTARGNLVAVISNGTAVLGL GNIGPLAGKPVMEGKGVLFQKFAGIDVFDIEIDESDPDKLVDIIASLEPTFGGVNLEDIKAPECFIVERKLRERMSIPVF HDDQHGTAIIVGAAVLNAMVITGKKIGEVKLATTGMGAAGVSCVNMLVSLGLNPDNILAYDREGVIHTGRTDLDPEKQRY ARDTDKRTLAEIVEGADIFLGLSAAGILTPEMVATMAPDPVIFALANPIPEIMPEVVCAVRTDAIIGTGRSDYPNQINNV LCFPYLFRGALDVGATTINEEMKIACVKAIAALARCEASDLGAAYGGETPSFGREYLIPRPLDPRLLVELSSAVAQAAMD SGVATRPITDMSAYHDKLSQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVILRAVQNVIDEGLAFPILIGRPDVIESR IQRMGLRMKVGVDFEVTNIHDDPRFNDYWQYYHGVTERRGVTVSAAKELMRSRPTLIASVMVARGEADALLTGAVGRFHK RLGYARSVIPLEPRVSSTAAMTGVINQHGAFFFVDTHVQEDPSAEQITEATLQACYRLRLFGIEPSVALLSHSNFGSHDS RDALKMRQVRELLLKRSPRLNIDGEMQADTAWDEVLRERIMPNTTLKGRANLFVFPNLEAANIAYNLVRVFTDGVAIGPI LMGISKAVHILTSSTTSRRVMNMTAIAAVDAQIRKQFEGGKRGG
Sequences:
>Translated_764_residues MSNDTFKQAAIDYHRTQPAGKIKVVATKPMLTQRDLSLAYSPGVAFACQAIVENPQQASELTARGNLVAVISNGTAVLGL GNIGPLAGKPVMEGKGVLFQKFAGIDVFDIEIDESDPDKLVDIIASLEPTFGGVNLEDIKAPECFIVERKLRERMSIPVF HDDQHGTAIIVGAAVLNAMVITGKKIGEVKLATTGMGAAGVSCVNMLVSLGLNPDNILAYDREGVIHTGRTDLDPEKQRY ARDTDKRTLAEIVEGADIFLGLSAAGILTPEMVATMAPDPVIFALANPIPEIMPEVVCAVRTDAIIGTGRSDYPNQINNV LCFPYLFRGALDVGATTINEEMKIACVKAIAALARCEASDLGAAYGGETPSFGREYLIPRPLDPRLLVELSSAVAQAAMD SGVATRPITDMSAYHDKLSQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVILRAVQNVIDEGLAFPILIGRPDVIESR IQRMGLRMKVGVDFEVTNIHDDPRFNDYWQYYHGVTERRGVTVSAAKELMRSRPTLIASVMVARGEADALLTGAVGRFHK RLGYARSVIPLEPRVSSTAAMTGVINQHGAFFFVDTHVQEDPSAEQITEATLQACYRLRLFGIEPSVALLSHSNFGSHDS RDALKMRQVRELLLKRSPRLNIDGEMQADTAWDEVLRERIMPNTTLKGRANLFVFPNLEAANIAYNLVRVFTDGVAIGPI LMGISKAVHILTSSTTSRRVMNMTAIAAVDAQIRKQFEGGKRGG >Mature_763_residues SNDTFKQAAIDYHRTQPAGKIKVVATKPMLTQRDLSLAYSPGVAFACQAIVENPQQASELTARGNLVAVISNGTAVLGLG NIGPLAGKPVMEGKGVLFQKFAGIDVFDIEIDESDPDKLVDIIASLEPTFGGVNLEDIKAPECFIVERKLRERMSIPVFH DDQHGTAIIVGAAVLNAMVITGKKIGEVKLATTGMGAAGVSCVNMLVSLGLNPDNILAYDREGVIHTGRTDLDPEKQRYA RDTDKRTLAEIVEGADIFLGLSAAGILTPEMVATMAPDPVIFALANPIPEIMPEVVCAVRTDAIIGTGRSDYPNQINNVL CFPYLFRGALDVGATTINEEMKIACVKAIAALARCEASDLGAAYGGETPSFGREYLIPRPLDPRLLVELSSAVAQAAMDS GVATRPITDMSAYHDKLSQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVILRAVQNVIDEGLAFPILIGRPDVIESRI QRMGLRMKVGVDFEVTNIHDDPRFNDYWQYYHGVTERRGVTVSAAKELMRSRPTLIASVMVARGEADALLTGAVGRFHKR LGYARSVIPLEPRVSSTAAMTGVINQHGAFFFVDTHVQEDPSAEQITEATLQACYRLRLFGIEPSVALLSHSNFGSHDSR DALKMRQVRELLLKRSPRLNIDGEMQADTAWDEVLRERIMPNTTLKGRANLFVFPNLEAANIAYNLVRVFTDGVAIGPIL MGISKAVHILTSSTTSRRVMNMTAIAAVDAQIRKQFEGGKRGG
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=397, Percent_Identity=24.9370277078086, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI62420880, Length=397, Percent_Identity=24.9370277078086, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI239049447, Length=397, Percent_Identity=24.9370277078086, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI4505143, Length=395, Percent_Identity=24.0506329113924, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1788806, Length=756, Percent_Identity=57.2751322751323, Blast_Score=885, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=315, Percent_Identity=27.9365079365079, Blast_Score=132, Evalue=7e-32, Organism=Escherichia coli, GI1788635, Length=346, Percent_Identity=26.878612716763, Blast_Score=129, Evalue=9e-31, Organism=Escherichia coli, GI87081919, Length=237, Percent_Identity=25.7383966244726, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17537199, Length=397, Percent_Identity=26.9521410579345, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=245, Percent_Identity=28.9795918367347, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI21356279, Length=506, Percent_Identity=26.4822134387352, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI281362674, Length=490, Percent_Identity=27.1428571428571, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI281362672, Length=490, Percent_Identity=27.1428571428571, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI78707242, Length=410, Percent_Identity=25.1219512195122, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707238, Length=410, Percent_Identity=25.1219512195122, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707240, Length=410, Percent_Identity=25.1219512195122, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83156; Mature: 83025
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDTFKQAAIDYHRTQPAGKIKVVATKPMLTQRDLSLAYSPGVAFACQAIVENPQQASE CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHH LTARGNLVAVISNGTAVLGLGNIGPLAGKPVMEGKGVLFQKFAGIDVFDIEIDESDPDKL HHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCHHHH VDIIASLEPTFGGVNLEDIKAPECFIVERKLRERMSIPVFHDDQHGTAIIVGAAVLNAMV HHHHHHCCCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH ITGKKIGEVKLATTGMGAAGVSCVNMLVSLGLNPDNILAYDREGVIHTGRTDLDPEKQRY CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCHHHHHH ARDTDKRTLAEIVEGADIFLGLSAAGILTPEMVATMAPDPVIFALANPIPEIMPEVVCAV HCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH RTDAIIGTGRSDYPNQINNVLCFPYLFRGALDVGATTINEEMKIACVKAIAALARCEASD HCCEEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCHHH LGAAYGGETPSFGREYLIPRPLDPRLLVELSSAVAQAAMDSGVATRPITDMSAYHDKLSQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FVYRTSLMMKPVYDRARADKQRVVYAEGEEEVILRAVQNVIDEGLAFPILIGRPDVIESR HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH IQRMGLRMKVGVDFEVTNIHDDPRFNDYWQYYHGVTERRGVTVSAAKELMRSRPTLIASV HHHCCCEEEECCEEEEECCCCCCCCCHHHHHHCCHHHHCCEEHHHHHHHHHCCCHHHHHH MVARGEADALLTGAVGRFHKRLGYARSVIPLEPRVSSTAAMTGVINQHGAFFFVDTHVQE HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC DPSAEQITEATLQACYRLRLFGIEPSVALLSHSNFGSHDSRDALKMRQVRELLLKRSPRL CCCHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC NIDGEMQADTAWDEVLRERIMPNTTLKGRANLFVFPNLEAANIAYNLVRVFTDGVAIGPI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH LMGISKAVHILTSSTTSRRVMNMTAIAAVDAQIRKQFEGGKRGG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNDTFKQAAIDYHRTQPAGKIKVVATKPMLTQRDLSLAYSPGVAFACQAIVENPQQASE CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHH LTARGNLVAVISNGTAVLGLGNIGPLAGKPVMEGKGVLFQKFAGIDVFDIEIDESDPDKL HHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCHHHH VDIIASLEPTFGGVNLEDIKAPECFIVERKLRERMSIPVFHDDQHGTAIIVGAAVLNAMV HHHHHHCCCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH ITGKKIGEVKLATTGMGAAGVSCVNMLVSLGLNPDNILAYDREGVIHTGRTDLDPEKQRY CCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCHHHHHH ARDTDKRTLAEIVEGADIFLGLSAAGILTPEMVATMAPDPVIFALANPIPEIMPEVVCAV HCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH RTDAIIGTGRSDYPNQINNVLCFPYLFRGALDVGATTINEEMKIACVKAIAALARCEASD HCCEEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCHHH LGAAYGGETPSFGREYLIPRPLDPRLLVELSSAVAQAAMDSGVATRPITDMSAYHDKLSQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FVYRTSLMMKPVYDRARADKQRVVYAEGEEEVILRAVQNVIDEGLAFPILIGRPDVIESR HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH IQRMGLRMKVGVDFEVTNIHDDPRFNDYWQYYHGVTERRGVTVSAAKELMRSRPTLIASV HHHCCCEEEECCEEEEECCCCCCCCCHHHHHHCCHHHHCCEEHHHHHHHHHCCCHHHHHH MVARGEADALLTGAVGRFHKRLGYARSVIPLEPRVSSTAAMTGVINQHGAFFFVDTHVQE HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC DPSAEQITEATLQACYRLRLFGIEPSVALLSHSNFGSHDSRDALKMRQVRELLLKRSPRL CCCHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC NIDGEMQADTAWDEVLRERIMPNTTLKGRANLFVFPNLEAANIAYNLVRVFTDGVAIGPI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH LMGISKAVHILTSSTTSRRVMNMTAIAAVDAQIRKQFEGGKRGG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]