Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680825
Identifier: 182680825
GI number: 182680825
Start: 339934
End: 340194
Strand: Direct
Name: 182680825
Synonym: XfasM23_0260
Alternate gene names: NA
Gene position: 339934-340194 (Clockwise)
Preceding gene: 182680824
Following gene: 182680826
Centisome position: 13.41
GC content: 54.02
Gene sequence:
>261_bases ATGGCATTGATCGTGGGACGCATACGTCAGTGGGATCGTGCATTGGGATCGCATGTGTCCATTAGAGATTCTGGCGTCAT GCAGGCGCGCGCGCAGCGTGATATGGCTCCCCAGCGTTGCGTTGGCGGGTTTGTCTGTTGCTGTCTTGCGGTGCTAATCA GTGCTTATGGATTTGTGTCATTGCTGTGTTGTCGCTGTATCCGCAAGCATGCTTCATTGCGGTGTGCTGTCTTGTGGGAT GGTGCGGTATACCTGTGTTAG
Upstream 100 bases:
>100_bases TATACGTGGCGCAGTAGCATGTTGCCGCCCCGTTGAGTGCTCAGTGTATGAGGGTACGAGGTGGCGTGTGTATTGCGCTT TAGTCAGGTGCTGGCCGCTC
Downstream 100 bases:
>100_bases TCGTGTTGCTGTGAGGTGGGGCATCATGGGTTTTGGGGGGTGATGCAGGTCGTTGTATTGATCATTAGAAATAGGTGGTT GCGAGCATGCAGCGGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MALIVGRIRQWDRALGSHVSIRDSGVMQARAQRDMAPQRCVGGFVCCCLAVLISAYGFVSLLCCRCIRKHASLRCAVLWD GAVYLC
Sequences:
>Translated_86_residues MALIVGRIRQWDRALGSHVSIRDSGVMQARAQRDMAPQRCVGGFVCCCLAVLISAYGFVSLLCCRCIRKHASLRCAVLWD GAVYLC >Mature_85_residues ALIVGRIRQWDRALGSHVSIRDSGVMQARAQRDMAPQRCVGGFVCCCLAVLISAYGFVSLLCCRCIRKHASLRCAVLWDG AVYLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9476; Mature: 9345
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 10.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 12.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIVGRIRQWDRALGSHVSIRDSGVMQARAQRDMAPQRCVGGFVCCCLAVLISAYGFVS CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLCCRCIRKHASLRCAVLWDGAVYLC HHHHHHHHHHCCCEEEEEECCEEECC >Mature Secondary Structure ALIVGRIRQWDRALGSHVSIRDSGVMQARAQRDMAPQRCVGGFVCCCLAVLISAYGFVS CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LLCCRCIRKHASLRCAVLWDGAVYLC HHHHHHHHHHCCCEEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA