Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 182680823

GI number: 182680823

Start: 337447

End: 338820

Strand: Direct

Name: qseC [H]

Synonym: XfasM23_0258

Alternate gene names: 182680823

Gene position: 337447-338820 (Clockwise)

Preceding gene: 182680822

Following gene: 182680824

Centisome position: 13.31

GC content: 55.39

Gene sequence:

>1374_bases
ATGAAGCGTGCGATTAACGGTGGTTCGATCCGCCGTACCTTGTGGTTGTATCTCGGCGCATTCTCGATGATGAGCACCGT
GTTCCTGTTCTTTGCCGCGCGTGACTACGGGCAGCGTGCTGCTGACGGTTCTTATGACCATTTGTTGGTGTCCTCTGCGT
TATCGATCTTGGGCAGCGTCTCGCTGGTCGATGGACAGTGGCAGGTGGATCTGCCTTATGTGGCGTTGGACGTATTGGCG
ATGGCACCTGAAGACCGGGTTTTTTATCGTGTTTACGATGTACACGGCCACATTATGACCGGGTATGGTGACCTACCGTC
ACCACCGCGTGTGCCGTTGCCTGGGGAGGCACCCTTGCTGTTCGATGCTGACTACAGCGGTGAGCTGGTGCGGTTCGTCG
CGGTGGCAAGGACGCTTGCTTCAGTGGCAACACTGACTGAGGTGTATGTGCAAGTTGGTCAGACCCGGCAGGCACGTGAT
GCGTTGGCGCATGAAATGGTGGTGAACGCGTTGTTGGTGATTGCTGTCTTGACGCTGTTGTCACTGCCCTTGGTTGCGTT
GGGTGTATATCGCGCGTTGTGGCCGTTGCGTCGGATTGAGCGTGATTTAGCGCAGCGCCAACCCTGGGATCTAAAGCCGT
TGACGACTGCGCCGCCGCAAGAAATGGCGCAGATGGTCGGTGCACTGAACCACTTTATGGAGCGGCTGTCCAACAGTAAT
GAAACGTTACGTGCGTTTATGGGGGAAGCCGCGCATCAGATGCGTACCCCACTGGCTGCATTGCGTGCTCAGGCGCAGCT
TGCATTGGAGGAAGGGGATGCGTTCCAGTTGCGTTGCAGTTTGACGGCGATTGAGCGTAATGCAAGCCACATGAGTCGCT
TGCTTAACCAGTTGCTGAGTGATGCCAGTGCGATTCATCGTACCCAGATACAGCACTTTGAGGAGGTGAATCTGCTCGAG
TTGATCCACCAGGCCGTGTCTGAAGTCGTGCCATATAGGGAGGAGATGCTATGTGTGCAGTGGACGAATGATCCGCATCC
AGCATGGATACGTGGTGATGCCTTGTTGCTGCGCGAAGCACTGAAAAATTTGGTCGACAATGCCTGCAAATACGGGGGTG
GCAGCTTGCAGTTGACATTGACCAGTGACGCACATGAGTGTGTCTTGACATTGGCCGATCAAGGTCCGGGGATTGCTCCT
AGTGAGGCTGAGCGTGTGTTTGAGCGTTTTGTGCGTGGCGTGCATGCATCCCCAGGGGGGGCGGGTCTGGGATTGGCGAT
TGTGAAACGGATCATTGATAACCATCGTGGCCGTATCGATCTATCTAATCGCATTGGTGGCGGCCTGATGATCACCCTAG
GTTTTCCTCGGTGA

Upstream 100 bases:

>100_bases
GTGGCACGGTTGCGTAGGAAATTGGAAGCGGCGCCACTGCGTATCGTGACTGTGCGTCGTGCAGGCTATCTCCTCGAACC
GATCGTTGAGGCTAGGGGCC

Downstream 100 bases:

>100_bases
CCCGCATCATGATCCGTGTTGCCGTTTTGCTGCTGTTATTGACCTGCCATTTTATGGTGTGGGCACATCCTGGTGAGATA
CGGCATTTTTCAACCAAAGG

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKRAINGGSIRRTLWLYLGAFSMMSTVFLFFAARDYGQRAADGSYDHLLVSSALSILGSVSLVDGQWQVDLPYVALDVLA
MAPEDRVFYRVYDVHGHIMTGYGDLPSPPRVPLPGEAPLLFDADYSGELVRFVAVARTLASVATLTEVYVQVGQTRQARD
ALAHEMVVNALLVIAVLTLLSLPLVALGVYRALWPLRRIERDLAQRQPWDLKPLTTAPPQEMAQMVGALNHFMERLSNSN
ETLRAFMGEAAHQMRTPLAALRAQAQLALEEGDAFQLRCSLTAIERNASHMSRLLNQLLSDASAIHRTQIQHFEEVNLLE
LIHQAVSEVVPYREEMLCVQWTNDPHPAWIRGDALLLREALKNLVDNACKYGGGSLQLTLTSDAHECVLTLADQGPGIAP
SEAERVFERFVRGVHASPGGAGLGLAIVKRIIDNHRGRIDLSNRIGGGLMITLGFPR

Sequences:

>Translated_457_residues
MKRAINGGSIRRTLWLYLGAFSMMSTVFLFFAARDYGQRAADGSYDHLLVSSALSILGSVSLVDGQWQVDLPYVALDVLA
MAPEDRVFYRVYDVHGHIMTGYGDLPSPPRVPLPGEAPLLFDADYSGELVRFVAVARTLASVATLTEVYVQVGQTRQARD
ALAHEMVVNALLVIAVLTLLSLPLVALGVYRALWPLRRIERDLAQRQPWDLKPLTTAPPQEMAQMVGALNHFMERLSNSN
ETLRAFMGEAAHQMRTPLAALRAQAQLALEEGDAFQLRCSLTAIERNASHMSRLLNQLLSDASAIHRTQIQHFEEVNLLE
LIHQAVSEVVPYREEMLCVQWTNDPHPAWIRGDALLLREALKNLVDNACKYGGGSLQLTLTSDAHECVLTLADQGPGIAP
SEAERVFERFVRGVHASPGGAGLGLAIVKRIIDNHRGRIDLSNRIGGGLMITLGFPR
>Mature_457_residues
MKRAINGGSIRRTLWLYLGAFSMMSTVFLFFAARDYGQRAADGSYDHLLVSSALSILGSVSLVDGQWQVDLPYVALDVLA
MAPEDRVFYRVYDVHGHIMTGYGDLPSPPRVPLPGEAPLLFDADYSGELVRFVAVARTLASVATLTEVYVQVGQTRQARD
ALAHEMVVNALLVIAVLTLLSLPLVALGVYRALWPLRRIERDLAQRQPWDLKPLTTAPPQEMAQMVGALNHFMERLSNSN
ETLRAFMGEAAHQMRTPLAALRAQAQLALEEGDAFQLRCSLTAIERNASHMSRLLNQLLSDASAIHRTQIQHFEEVNLLE
LIHQAVSEVVPYREEMLCVQWTNDPHPAWIRGDALLLREALKNLVDNACKYGGGSLQLTLTSDAHECVLTLADQGPGIAP
SEAERVFERFVRGVHASPGGAGLGLAIVKRIIDNHRGRIDLSNRIGGGLMITLGFPR

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=307, Percent_Identity=30.6188925081433, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1790551, Length=299, Percent_Identity=30.1003344481605, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1786783, Length=304, Percent_Identity=27.9605263157895, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788393, Length=252, Percent_Identity=28.968253968254, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1789808, Length=245, Percent_Identity=26.9387755102041, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1790346, Length=293, Percent_Identity=26.962457337884, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1786912, Length=238, Percent_Identity=31.0924369747899, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=26.457399103139, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788279, Length=304, Percent_Identity=25.9868421052632, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787894, Length=235, Percent_Identity=28.5106382978723, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787374, Length=291, Percent_Identity=23.0240549828179, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=23.75, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790861, Length=275, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082128, Length=293, Percent_Identity=25.938566552901, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081816, Length=219, Percent_Identity=29.2237442922374, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788549, Length=254, Percent_Identity=27.1653543307087, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1790436, Length=215, Percent_Identity=28.8372093023256, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50369; Mature: 50369

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAINGGSIRRTLWLYLGAFSMMSTVFLFFAARDYGQRAADGSYDHLLVSSALSILGSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
SLVDGQWQVDLPYVALDVLAMAPEDRVFYRVYDVHGHIMTGYGDLPSPPRVPLPGEAPLL
EEECCCEEECCHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCEE
FDADYSGELVRFVAVARTLASVATLTEVYVQVGQTRQARDALAHEMVVNALLVIAVLTLL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLPLVALGVYRALWPLRRIERDLAQRQPWDLKPLTTAPPQEMAQMVGALNHFMERLSNSN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
ETLRAFMGEAAHQMRTPLAALRAQAQLALEEGDAFQLRCSLTAIERNASHMSRLLNQLLS
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHH
DASAIHRTQIQHFEEVNLLELIHQAVSEVVPYREEMLCVQWTNDPHPAWIRGDALLLREA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCEECCHHHHHHHH
LKNLVDNACKYGGGSLQLTLTSDAHECVLTLADQGPGIAPSEAERVFERFVRGVHASPGG
HHHHHHHHHHCCCCEEEEEECCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
AGLGLAIVKRIIDNHRGRIDLSNRIGGGLMITLGFPR
CHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCC
>Mature Secondary Structure
MKRAINGGSIRRTLWLYLGAFSMMSTVFLFFAARDYGQRAADGSYDHLLVSSALSILGSV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
SLVDGQWQVDLPYVALDVLAMAPEDRVFYRVYDVHGHIMTGYGDLPSPPRVPLPGEAPLL
EEECCCEEECCHHHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCEE
FDADYSGELVRFVAVARTLASVATLTEVYVQVGQTRQARDALAHEMVVNALLVIAVLTLL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLPLVALGVYRALWPLRRIERDLAQRQPWDLKPLTTAPPQEMAQMVGALNHFMERLSNSN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH
ETLRAFMGEAAHQMRTPLAALRAQAQLALEEGDAFQLRCSLTAIERNASHMSRLLNQLLS
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHH
DASAIHRTQIQHFEEVNLLELIHQAVSEVVPYREEMLCVQWTNDPHPAWIRGDALLLREA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCEECCHHHHHHHH
LKNLVDNACKYGGGSLQLTLTSDAHECVLTLADQGPGIAPSEAERVFERFVRGVHASPGG
HHHHHHHHHHCCCCEEEEEECCCCHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
AGLGLAIVKRIIDNHRGRIDLSNRIGGGLMITLGFPR
CHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]