Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 170756001

GI number: 170756001

Start: 1148350

End: 1148973

Strand: Reverse

Name: acrR [C]

Synonym: CLD_3525

Alternate gene names: 170756001

Gene position: 1148973-1148350 (Counterclockwise)

Preceding gene: 170757656

Following gene: 170757606

Centisome position: 29.03

GC content: 23.08

Gene sequence:

>624_bases
TTGAAATCTACAGAAAAAAATCTAAAAATCACAAAAGGAATGAAAACCAAACAAAAAATTTATAAAACTGCTATACATTT
ATTTGAAGCTCATGGAATTGATAATATAAGTATAAATGATATAGTTAAAGAAGTTGGAATTGCAAAGGGTTCTTTTTATG
TTCATTACGAATCAAAATTTGAATTAATTAAGGAATATGTTAGTTCTTTAGACTTAAACTATGAAGAATATTTCAAAAGT
ATACCTAAAAACACTTCAGCTTCTTCTATGCTTCTTTTAGTTACTGAAAAAACAGCTGAAGTTCTTATAAATGATATAGG
ATACGATATACTAAAAAATATTTATAAAAGTATGTTATCTCAAGAAATTGATTCGAATATTATATTAAATTACAATAGAA
GCCTTCCACAAATTTATACTAAAATCATTCTAAAAGGAATTGAGCAAAAAGAATTTAAAACCTCACTTAATGTTGAGTAT
ATTACAAGACAATTAATGATTAGCATTCGAGGAATAATATTTGAATGGCTCCTTTCTTATAATAAATTTGATTTGAAGAA
TGAAATTATTAATTATTTTAAATTTATAATAGATGGACTTAAAAATAAAACTGATAAGTTCTAG

Upstream 100 bases:

>100_bases
ATTTATAAATAATAAAATTTTTCCCTATATATTACAAATTAATACATGTAGCCTTGTATTTACAAGAAAGTTGTATATAA
TAAAAAAAGGGAGTGATATT

Downstream 100 bases:

>100_bases
ATTTGATATATTATTAGTTAAGCATAATGAACATTATGAAATAGAAGAAAGTATAAATAAAGTCTGCAAATTTTATGACA
TTGATATATAACTCTTTATG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR/AcrR Family Transcriptional Regulator; TetR Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKSTEKNLKITKGMKTKQKIYKTAIHLFEAHGIDNISINDIVKEVGIAKGSFYVHYESKFELIKEYVSSLDLNYEEYFKS
IPKNTSASSMLLLVTEKTAEVLINDIGYDILKNIYKSMLSQEIDSNIILNYNRSLPQIYTKIILKGIEQKEFKTSLNVEY
ITRQLMISIRGIIFEWLLSYNKFDLKNEIINYFKFIIDGLKNKTDKF

Sequences:

>Translated_207_residues
MKSTEKNLKITKGMKTKQKIYKTAIHLFEAHGIDNISINDIVKEVGIAKGSFYVHYESKFELIKEYVSSLDLNYEEYFKS
IPKNTSASSMLLLVTEKTAEVLINDIGYDILKNIYKSMLSQEIDSNIILNYNRSLPQIYTKIILKGIEQKEFKTSLNVEY
ITRQLMISIRGIIFEWLLSYNKFDLKNEIINYFKFIIDGLKNKTDKF
>Mature_207_residues
MKSTEKNLKITKGMKTKQKIYKTAIHLFEAHGIDNISINDIVKEVGIAKGSFYVHYESKFELIKEYVSSLDLNYEEYFKS
IPKNTSASSMLLLVTEKTAEVLINDIGYDILKNIYKSMLSQEIDSNIILNYNRSLPQIYTKIILKGIEQKEFKTSLNVEY
ITRQLMISIRGIIFEWLLSYNKFDLKNEIINYFKFIIDGLKNKTDKF

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786669, Length=203, Percent_Identity=24.6305418719212, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24199; Mature: 24199

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTEKNLKITKGMKTKQKIYKTAIHLFEAHGIDNISINDIVKEVGIAKGSFYVHYESKF
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECHHH
ELIKEYVSSLDLNYEEYFKSIPKNTSASSMLLLVTEKTAEVLINDIGYDILKNIYKSMLS
HHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHH
QEIDSNIILNYNRSLPQIYTKIILKGIEQKEFKTSLNVEYITRQLMISIRGIIFEWLLSY
HHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
NKFDLKNEIINYFKFIIDGLKNKTDKF
CCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSTEKNLKITKGMKTKQKIYKTAIHLFEAHGIDNISINDIVKEVGIAKGSFYVHYESKF
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECHHH
ELIKEYVSSLDLNYEEYFKSIPKNTSASSMLLLVTEKTAEVLINDIGYDILKNIYKSMLS
HHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCHHHHHHHHHHHHH
QEIDSNIILNYNRSLPQIYTKIILKGIEQKEFKTSLNVEYITRQLMISIRGIIFEWLLSY
HHCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
NKFDLKNEIINYFKFIIDGLKNKTDKF
CCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA