| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757606
Identifier: 170757606
GI number: 170757606
Start: 1148259
End: 1148381
Strand: Reverse
Name: 170757606
Synonym: CLD_3526
Alternate gene names: NA
Gene position: 1148381-1148259 (Counterclockwise)
Preceding gene: 170756001
Following gene: 170755813
Centisome position: 29.01
GC content: 20.33
Gene sequence:
>123_bases ATGGACTTAAAAATAAAACTGATAAGTTCTAGATTTGATATATTATTAGTTAAGCATAATGAACATTATGAAATAGAAGA AAGTATAAATAAAGTCTGCAAATTTTATGACATTGATATATAA
Upstream 100 bases:
>100_bases TTAATGATTAGCATTCGAGGAATAATATTTGAATGGCTCCTTTCTTATAATAAATTTGATTTGAAGAATGAAATTATTAA TTATTTTAAATTTATAATAG
Downstream 100 bases:
>100_bases CTCTTTATGACATCTAATATAGCATTTTATTTTTTATGAATAAAAAATAGTAGCCCTACTGTAAGTAAAAAGCTACTAAT TTTTATTATAAAAAATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MDLKIKLISSRFDILLVKHNEHYEIEESINKVCKFYDIDI
Sequences:
>Translated_40_residues MDLKIKLISSRFDILLVKHNEHYEIEESINKVCKFYDIDI >Mature_40_residues MDLKIKLISSRFDILLVKHNEHYEIEESINKVCKFYDIDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4854; Mature: 4854
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKIKLISSRFDILLVKHNEHYEIEESINKVCKFYDIDI CCEEEEEECCCEEEEEEECCCCEEHHHHHHHHHHEECCCC >Mature Secondary Structure MDLKIKLISSRFDILLVKHNEHYEIEESINKVCKFYDIDI CCEEEEEECCCEEEEEEECCCCEEHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA