| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757656
Identifier: 170757656
GI number: 170757656
Start: 1154666
End: 1156474
Strand: Reverse
Name: 170757656
Synonym: CLD_3519
Alternate gene names: NA
Gene position: 1156474-1154666 (Counterclockwise)
Preceding gene: 170756571
Following gene: 170756001
Centisome position: 29.22
GC content: 31.9
Gene sequence:
>1809_bases ATGAGTATTAAAAAAGAAAGAATTAAAGTATATGATATGACATGTACCTCTTGTGAAAATCGAGTTGAAAAAGCTATTAA AAAATTAGAAGGAGTATTACATGCAAAGGCTTCTTACATGGGAGAGTTTGTTGAAATTGAATATGATGATAAATTATGCA ACCAAAATAAAATTAAATCCGCTATAAAAAATGCTGGATACAGCACACAAAGTTCTAATGACTATAATTTTATGGGAGTT CTTATAATAGCTGCAGTTATTATACTCTTAGGCTTAAAGACTAGTGGTTTTGATATGGAAGAAAAGCTAACTAATGCTTC CTATATGATTCTTTTCGTAGTAGGGATTCTAACATCAATTCACTGTGTAGGCATGTGCGGTGGAATTATGCTTTCACAAA GTTTATCTAGTGAAAGTAATAATAAGTTTGAAGCTATGAAACCAGCAGTTTTATATAATTTAGGAAGAGTTTTATCTTAC ACACTACTTGGTGGAATAATTGGTACCCTAGGTTCAGTATTTTCGCTTTCTATTACTACAAAAGCAACTCTTCAAATATT TGCTGGTCTATTTATGATTATGATGGGTTTTAATATGGCTGGATTTAATATATTTAGAAAATTCCATATTAAGTTACCCC ACTTTGCATGTAAATTTAAAAGCAAATCTGGATCTCCATTTATTGTTGGTCTTTTAAATGGATTTATGCCCTGTGGACCT CTTCAAACTATGCAGCTTTTTGCTCTAGGTACAGGAAGTGCAGTAAAAGGCGCTTTATCAATGTTTATGTTTTCTTTAGG AACAGTACCACTTATGCTAACCTTTGGTGCATTATCAGGTCTTTTAAGTAAAGGTCATACTAAAAAGTTGCTTAAATTTA GTGGAGTCCTTATTATAGTTCTTGGGTTTATAATGGGTAACAGAGGTCTTACTCTTGCTGGTATAAATATTAATCCTATG AAAGCTCTGGCTAGCAATACTAGAAGTTCAGCTAATTTTTCTAATGCAAATGTTGCTAAAGCAACTTTAGAAAATGGTGT TCAGGTTATTAAAATGACTGCTAATAACAATGGTTATACACCTAATGCTTTTTATGTGCAAAAGGGAATGCCTGTTAAGT GGATAATTAATGGAGAACAACTTAATTCATGTAATAATGCCATTATAGCTCAATCTATAATGGAAAAAGAATTTAAGATA AAAAAAGGAGAAAATATTATAAACTTTACCCCTGGTGACAAAGATATAAATTTTAGCTGTTGGATGGGAATGATAAGTGG CGTAATTAAGGTTGTAGATAACCTTGATGCCGTAGATACATCAAAAACTGATCCATCATTACCTCCTGCGAGCACAGGTC CTAGCTGCTGTGCTGTACCAGTAGATGAATCTGATCAATCAGAACAATCTAGCATTTATGGCAACAATATGGCTCTAGTG CCAACTGAAAAGCTAATTAATAAAGCTATACCATCTGGTGAATACCAAAGTGCAACCTTTAAAGGTATTGGTTCTGAATT ACAGCCATTAATAGCTGTTACAGGTAATAGTTCAAAAACTAAATTAACCTTTAATTTAAATGATTTTGATAATGCTGAAG GTAAATATATAATCTTAGATTTAGAAACTCGTAATGAAGTCTTTTCATTTACCGCAAAAAAAGGTGTAAATGAAGTAGAG TTTAGTCCTAAAAAAGCTGGTAGTTATGGAATATTAAAAGATAATGTAATTTTAGGGATAATTGAAGTGGTTGATGATTT AGAGTCTGCCGATATGGAAAAAATACGAGAAAAACATGTTGATGAGTAA
Upstream 100 bases:
>100_bases TAGTATTTTACTTAAGAAAATAAGAATCATCTAACTTTTTATTATGATAGGTAAAGTATGAAATTACTTCATCTTATAAG TACATATTAGGAGGAATTCT
Downstream 100 bases:
>100_bases ACAAGAATATTCTTAAAATAAAAAAAGAGAAGTGTATGATAAATTTAATATCATCCTTCTCTTTTTTTCTTATCTACCTT ACTATAACTATTTCAATTTA
Product: heavy metal-binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MSIKKERIKVYDMTCTSCENRVEKAIKKLEGVLHAKASYMGEFVEIEYDDKLCNQNKIKSAIKNAGYSTQSSNDYNFMGV LIIAAVIILLGLKTSGFDMEEKLTNASYMILFVVGILTSIHCVGMCGGIMLSQSLSSESNNKFEAMKPAVLYNLGRVLSY TLLGGIIGTLGSVFSLSITTKATLQIFAGLFMIMMGFNMAGFNIFRKFHIKLPHFACKFKSKSGSPFIVGLLNGFMPCGP LQTMQLFALGTGSAVKGALSMFMFSLGTVPLMLTFGALSGLLSKGHTKKLLKFSGVLIIVLGFIMGNRGLTLAGININPM KALASNTRSSANFSNANVAKATLENGVQVIKMTANNNGYTPNAFYVQKGMPVKWIINGEQLNSCNNAIIAQSIMEKEFKI KKGENIINFTPGDKDINFSCWMGMISGVIKVVDNLDAVDTSKTDPSLPPASTGPSCCAVPVDESDQSEQSSIYGNNMALV PTEKLINKAIPSGEYQSATFKGIGSELQPLIAVTGNSSKTKLTFNLNDFDNAEGKYIILDLETRNEVFSFTAKKGVNEVE FSPKKAGSYGILKDNVILGIIEVVDDLESADMEKIREKHVDE
Sequences:
>Translated_602_residues MSIKKERIKVYDMTCTSCENRVEKAIKKLEGVLHAKASYMGEFVEIEYDDKLCNQNKIKSAIKNAGYSTQSSNDYNFMGV LIIAAVIILLGLKTSGFDMEEKLTNASYMILFVVGILTSIHCVGMCGGIMLSQSLSSESNNKFEAMKPAVLYNLGRVLSY TLLGGIIGTLGSVFSLSITTKATLQIFAGLFMIMMGFNMAGFNIFRKFHIKLPHFACKFKSKSGSPFIVGLLNGFMPCGP LQTMQLFALGTGSAVKGALSMFMFSLGTVPLMLTFGALSGLLSKGHTKKLLKFSGVLIIVLGFIMGNRGLTLAGININPM KALASNTRSSANFSNANVAKATLENGVQVIKMTANNNGYTPNAFYVQKGMPVKWIINGEQLNSCNNAIIAQSIMEKEFKI KKGENIINFTPGDKDINFSCWMGMISGVIKVVDNLDAVDTSKTDPSLPPASTGPSCCAVPVDESDQSEQSSIYGNNMALV PTEKLINKAIPSGEYQSATFKGIGSELQPLIAVTGNSSKTKLTFNLNDFDNAEGKYIILDLETRNEVFSFTAKKGVNEVE FSPKKAGSYGILKDNVILGIIEVVDDLESADMEKIREKHVDE >Mature_601_residues SIKKERIKVYDMTCTSCENRVEKAIKKLEGVLHAKASYMGEFVEIEYDDKLCNQNKIKSAIKNAGYSTQSSNDYNFMGVL IIAAVIILLGLKTSGFDMEEKLTNASYMILFVVGILTSIHCVGMCGGIMLSQSLSSESNNKFEAMKPAVLYNLGRVLSYT LLGGIIGTLGSVFSLSITTKATLQIFAGLFMIMMGFNMAGFNIFRKFHIKLPHFACKFKSKSGSPFIVGLLNGFMPCGPL QTMQLFALGTGSAVKGALSMFMFSLGTVPLMLTFGALSGLLSKGHTKKLLKFSGVLIIVLGFIMGNRGLTLAGININPMK ALASNTRSSANFSNANVAKATLENGVQVIKMTANNNGYTPNAFYVQKGMPVKWIINGEQLNSCNNAIIAQSIMEKEFKIK KGENIINFTPGDKDINFSCWMGMISGVIKVVDNLDAVDTSKTDPSLPPASTGPSCCAVPVDESDQSEQSSIYGNNMALVP TEKLINKAIPSGEYQSATFKGIGSELQPLIAVTGNSSKTKLTFNLNDFDNAEGKYIILDLETRNEVFSFTAKKGVNEVEF SPKKAGSYGILKDNVILGIIEVVDDLESADMEKIREKHVDE
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65277; Mature: 65146
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKKERIKVYDMTCTSCENRVEKAIKKLEGVLHAKASYMGEFVEIEYDDKLCNQNKIKS CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCHHHHHH AIKNAGYSTQSSNDYNFMGVLIIAAVIILLGLKTSGFDMEEKLTNASYMILFVVGILTSI HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH HCVGMCGGIMLSQSLSSESNNKFEAMKPAVLYNLGRVLSYTLLGGIIGTLGSVFSLSITT HHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECH KATLQIFAGLFMIMMGFNMAGFNIFRKFHIKLPHFACKFKSKSGSPFIVGLLNGFMPCGP HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCEEEEECCCCCCCEEEEHHHCCCCCCC LQTMQLFALGTGSAVKGALSMFMFSLGTVPLMLTFGALSGLLSKGHTKKLLKFSGVLIIV HHHEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHH LGFIMGNRGLTLAGININPMKALASNTRSSANFSNANVAKATLENGVQVIKMTANNNGYT HHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCC PNAFYVQKGMPVKWIINGEQLNSCNNAIIAQSIMEKEFKIKKGENIINFTPGDKDINFSC CCEEEEECCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH WMGMISGVIKVVDNLDAVDTSKTDPSLPPASTGPSCCAVPVDESDQSEQSSIYGNNMALV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCEEEE PTEKLINKAIPSGEYQSATFKGIGSELQPLIAVTGNSSKTKLTFNLNDFDNAEGKYIILD EHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEE LETRNEVFSFTAKKGVNEVEFSPKKAGSYGILKDNVILGIIEVVDDLESADMEKIREKHV ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHHHCC DE CC >Mature Secondary Structure SIKKERIKVYDMTCTSCENRVEKAIKKLEGVLHAKASYMGEFVEIEYDDKLCNQNKIKS CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCHHHHHH AIKNAGYSTQSSNDYNFMGVLIIAAVIILLGLKTSGFDMEEKLTNASYMILFVVGILTSI HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHH HCVGMCGGIMLSQSLSSESNNKFEAMKPAVLYNLGRVLSYTLLGGIIGTLGSVFSLSITT HHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECH KATLQIFAGLFMIMMGFNMAGFNIFRKFHIKLPHFACKFKSKSGSPFIVGLLNGFMPCGP HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCEEEEECCCCCCCEEEEHHHCCCCCCC LQTMQLFALGTGSAVKGALSMFMFSLGTVPLMLTFGALSGLLSKGHTKKLLKFSGVLIIV HHHEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHH LGFIMGNRGLTLAGININPMKALASNTRSSANFSNANVAKATLENGVQVIKMTANNNGYT HHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCCC PNAFYVQKGMPVKWIINGEQLNSCNNAIIAQSIMEKEFKIKKGENIINFTPGDKDINFSC CCEEEEECCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHH WMGMISGVIKVVDNLDAVDTSKTDPSLPPASTGPSCCAVPVDESDQSEQSSIYGNNMALV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCEEEE PTEKLINKAIPSGEYQSATFKGIGSELQPLIAVTGNSSKTKLTFNLNDFDNAEGKYIILD EHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEE LETRNEVFSFTAKKGVNEVEFSPKKAGSYGILKDNVILGIIEVVDDLESADMEKIREKHV ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHHHCC DE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA