| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is bcrC [H]
Identifier: 170754346
GI number: 170754346
Start: 3719025
End: 3719612
Strand: Reverse
Name: bcrC [H]
Synonym: CLD_1100
Alternate gene names: 170754346
Gene position: 3719612-3719025 (Counterclockwise)
Preceding gene: 170755166
Following gene: 170755963
Centisome position: 93.97
GC content: 24.49
Gene sequence:
>588_bases ATGAATATGGAATTTTTTCGATTAATAAATAATTTAGCAAATAAAAATAGTGTTTTAGATAAGATAATAATTTTTTTCTC AAAGGATATACCCTATATATTTATGGCGATAGTTGCAATAGTATTTATTTTAGGAATTACAAGAAAGAATTGTGATTATA GAAAAGTTGCTGTTAATACTTTTATTATTGCAGTAATTAATCTAACTATAAGTTTTATTATTGGAGGCGTATATTATGTG GACAGGCCTTTTGCTCATAATAAGGTAAATTTATTATATATACATGCAAAAAATTCATCCCTTCCAAGTGACCATGCAAT AGGGACAATGAGTATAGCATTAGGACTTAGAAAGTACAATAAATTACTTAGTTTAATACTAACTGTATTTTCCATTATTG TAGGATTTTCAAGAGTATATGTTGGACATCATTATCCTTTAGATATTATAGGAGCATATATAATTGTCTTTGCAACAAAT TATATTTATAACTTGAAATTAAGAAATAAAGTAGAAAGTTTATATGAAGCAGTTGAGAAGAAATTAGTAGAAAAATTTGG CTTTAAAAAGATATGCAATAAAATTTAA
Upstream 100 bases:
>100_bases TATATTATGCTCAAAATTAATTTTTATAATTTTACAAGAAGGATACATGGGAAAAATTACTGTTTTTTATCAAAATATAT TATAGGAAGGATAGTTCAAT
Downstream 100 bases:
>100_bases AATCATATTAAATAACATAAGCATAAAATCCATAGCGTGTGTTATCTAAATATTGTTATACATAATTTTTCATGATTATT TTAATTTTGTAAAAGGTATT
Product: PAP2 family protein
Products: NA
Alternate protein names: Undecaprenyl pyrophosphate phosphatase [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNMEFFRLINNLANKNSVLDKIIIFFSKDIPYIFMAIVAIVFILGITRKNCDYRKVAVNTFIIAVINLTISFIIGGVYYV DRPFAHNKVNLLYIHAKNSSLPSDHAIGTMSIALGLRKYNKLLSLILTVFSIIVGFSRVYVGHHYPLDIIGAYIIVFATN YIYNLKLRNKVESLYEAVEKKLVEKFGFKKICNKI
Sequences:
>Translated_195_residues MNMEFFRLINNLANKNSVLDKIIIFFSKDIPYIFMAIVAIVFILGITRKNCDYRKVAVNTFIIAVINLTISFIIGGVYYV DRPFAHNKVNLLYIHAKNSSLPSDHAIGTMSIALGLRKYNKLLSLILTVFSIIVGFSRVYVGHHYPLDIIGAYIIVFATN YIYNLKLRNKVESLYEAVEKKLVEKFGFKKICNKI >Mature_195_residues MNMEFFRLINNLANKNSVLDKIIIFFSKDIPYIFMAIVAIVFILGITRKNCDYRKVAVNTFIIAVINLTISFIIGGVYYV DRPFAHNKVNLLYIHAKNSSLPSDHAIGTMSIALGLRKYNKLLSLILTVFSIIVGFSRVYVGHHYPLDIIGAYIIVFATN YIYNLKLRNKVESLYEAVEKKLVEKFGFKKICNKI
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI1787064, Length=185, Percent_Identity=27.5675675675676, Blast_Score=88, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: =3.6.1.27 [H]
Molecular weight: Translated: 22324; Mature: 22324
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMEFFRLINNLANKNSVLDKIIIFFSKDIPYIFMAIVAIVFILGITRKNCDYRKVAVNT CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FIIAVINLTISFIIGGVYYVDRPFAHNKVNLLYIHAKNSSLPSDHAIGTMSIALGLRKYN HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH KLLSLILTVFSIIVGFSRVYVGHHYPLDIIGAYIIVFATNYIYNLKLRNKVESLYEAVEK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH KLVEKFGFKKICNKI HHHHHHCHHHHHHCC >Mature Secondary Structure MNMEFFRLINNLANKNSVLDKIIIFFSKDIPYIFMAIVAIVFILGITRKNCDYRKVAVNT CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FIIAVINLTISFIIGGVYYVDRPFAHNKVNLLYIHAKNSSLPSDHAIGTMSIALGLRKYN HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH KLLSLILTVFSIIVGFSRVYVGHHYPLDIIGAYIIVFATNYIYNLKLRNKVESLYEAVEK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHH KLVEKFGFKKICNKI HHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 14612242 [H]