Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is sepP [H]

Identifier: 170755166

GI number: 170755166

Start: 3719628

End: 3720188

Strand: Reverse

Name: sepP [H]

Synonym: CLD_1099

Alternate gene names: 170755166

Gene position: 3720188-3719628 (Counterclockwise)

Preceding gene: 170757691

Following gene: 170754346

Centisome position: 93.99

GC content: 25.67

Gene sequence:

>561_bases
ATGTTATTGATACAGAATATTGATAATTGTATTCTATATGTTATTAAGAAATATGTACAAAATAAATATTTAGATATATT
GATGCCTAGAATAACAAAAATGGGTGAACTAGGAATCATTTGGATTGCAATAGCTCTTGTTTTAATATTAAACACACTAT
ATAGAATAATAGGGATGGTAGTAATACTAACATTAATTATAAGTACAATTATTGGAGAAGGAATAATAAAACATATTGTA
AGACGAATTAGGCCATGTAATCAGCAGAATAGTTTCAATATGCTGATTTTAAAACCAATGTCTTATTCTTTTCCTTCAGG
ACATACTTTATCTTCCTTTGCTGTTGCAGAGGTTCTATCTGTGTATTTTGCTCAATATAAGTTGATACTTATGACAATAG
CATTTTTAATAGCTTTATCCAGAATATATTTATATGTTCATTATCCAACGGATGTTATAGCAGGAATTATACTTGGTATA
TTATGCTCAAAATTAATTTTTATAATTTTACAAGAAGGATACATGGGAAAAATTACTGTTTTTTATCAAAATATATTATA
G

Upstream 100 bases:

>100_bases
CATTTTTCATATATATTGGTTGCTATTGTAATAATATCCATTATTCCGGGAGTGGTTGTGTTTATTAGGGAAAAGAGAAA
TGGAGGTAAGAAAGAATAAG

Downstream 100 bases:

>100_bases
GAAGGATAGTTCAATATGAATATGGAATTTTTTCGATTAATAAATAATTTAGCAAATAAAAATAGTGTTTTAGATAAGAT
AATAATTTTTTTCTCAAAGG

Product: undecaprenyl-diphosphatase

Products: NA

Alternate protein names: Dolicholpyrophosphatase [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMVVILTLIISTIIGEGIIKHIV
RRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLSVYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGI
LCSKLIFIILQEGYMGKITVFYQNIL

Sequences:

>Translated_186_residues
MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMVVILTLIISTIIGEGIIKHIV
RRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLSVYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGI
LCSKLIFIILQEGYMGKITVFYQNIL
>Mature_186_residues
MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMVVILTLIISTIIGEGIIKHIV
RRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLSVYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGI
LCSKLIFIILQEGYMGKITVFYQNIL

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: =3.6.1.27 [H]

Molecular weight: Translated: 21235; Mature: 21235

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VILTLIISTIIGEGIIKHIVRRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
VYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGILCSKLIFIILQEGYMGKITV
HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FYQNIL
HHHHCC
>Mature Secondary Structure
MLLIQNIDNCILYVIKKYVQNKYLDILMPRITKMGELGIIWIAIALVLILNTLYRIIGMV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VILTLIISTIIGEGIIKHIVRRIRPCNQQNSFNMLILKPMSYSFPSGHTLSSFAVAEVLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH
VYFAQYKLILMTIAFLIALSRIYLYVHYPTDVIAGIILGILCSKLIFIILQEGYMGKITV
HHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FYQNIL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1321720 [H]