Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is rpsD

Identifier: 170755963

GI number:

Start: 3716646

End: 3717239

Strand: Reverse

Name: rpsD

Synonym: CLD_1102

Alternate gene names: NA

Gene position: NA

Preceding gene: 170754346

Following gene: 170755764

Centisome position: NA

GC content: NA

Gene sequence:

>594_bases
ATGGCTAAGATAAGAGATCCAAGATTTAAGTTATCTAGAAGGTTAGGGGTAAATATTTATGGACATCCTAAGGCTATGAA
AAGGGCCACAAGAGAAAACAGTAGGGAAGGTAAAAAACTATCAAATTATGGTAAACAACTTTTAGAGAAACAAAAGATAA
GATCTTATTATGGAGTTCTAGAAAAGCAATTTTTAAGATATGTTAAAAAGGCTATGAAAAGTAAAGAAAGAACTGGAGAC
GTTTTACTAAGAAGTCTTGAATGTAGGTTAGACAATATAGCATATAGAATAGGCTTTGCTAATTCTATAAGACAGGCTAG
ACAAATGGTGAATCATGGACATATATTAGTTAATGGTAGCAAAGTTAATATACCATCTTATGAAGTAAAAACAGGAGATG
TAATAACTCTAAGGGAGAAGTATAGAAAAAATGATGAGTTCGCTGATAATTTCTTAGCTTTAAAAAAATTTAGCCTACCA
TATATAGAAAAGGATTATGATAAATTTTCAGGAGTACTAATTAAAGAACCTGAAAGAGATGAAATACCAATAGATGCAAA
TGAAACTCTAGTAGTAGAATTATATTCTAAATAG

Upstream 100 bases:

>100_bases
ACAGATTAGACATTGAAAATCATTTTCAGTTATAGTATAATATAAATAGTTTTTAAAAAGACTATTATCGCGGCTAAGAA
TATAGTATTAGGAGGAAGAA

Downstream 100 bases:

>100_bases
AAAAGAACAAATTAATATTAAAAAATAACACATAACCTAAGAACAACTTTATACACAATTAAAAAATAACACACAACTCA
AAAACGACTTTATACACAAT

Product: 30S ribosomal protein S4

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>197_residues
MAKIRDPRFKLSRRLGVNIYGHPKAMKRATRENSREGKKLSNYGKQLLEKQKIRSYYGVLEKQFLRYVKKAMKSKERTGD
VLLRSLECRLDNIAYRIGFANSIRQARQMVNHGHILVNGSKVNIPSYEVKTGDVITLREKYRKNDEFADNFLALKKFSLP
YIEKDYDKFSGVLIKEPERDEIPIDANETLVVELYSK

Sequences:
NA

Specific function: NA

COG id: COG0522

COG function: function code J; Ribosomal protein S4 and related proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA