| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751635
Identifier: 170751635
GI number: 170751635
Start: 5581258
End: 5582064
Strand: Direct
Name: 170751635
Synonym: Mrad2831_5261
Alternate gene names: NA
Gene position: 5581258-5582064 (Clockwise)
Preceding gene: 170751634
Following gene: 170751636
Centisome position: 91.83
GC content: 73.73
Gene sequence:
>807_bases ATGAGCGGGGATCCGCGCCCGGTCGGCGAGGACGACCTGCACGGCCTGATCGACGGCCGCCTTGAACCGGAGCGGCAGGC GCTGGTCGAGGCGTGGCTCGCGGGGAACCCCGCGCGTGCGGCTGAAGTCTCGACGGACCGAGTTCTGCGCGAGCGCCTGC GCGCCCGCCTCGCGCCGATCGCCGAGGAGGCGATCCCGGCGCGACTGCGGGTGGCCAACATCCGCTCGCGACACCTGTAC CCTGGCGCAAGCTGGTTCCCCATGGCGGCTGCGGCCGTGCTCTGCCTCGCGCTCGGCGGCGCCGGCGGCTGGGTCGGCCA TGCCCTGCACGGTGTGCCCGCGGTGGCGGTGGCGGAGGCACCGGCGACGCAGGACGCGGTCGCAGCCTTCCGCACCTTCG TGGTCGAGGCGGTGCATCCGGTGGAGGTGCGCGCCGACGAGAAGCCCCACCTCGTGACGTGGCTCTCGAAGCGTCTCGGT CACGCGGTCGCGGCCCCCGACCTCTCGGCGCAGGGCTTCCGGCTGATGGGCGGGCGCCTGTTGCCGGCTGGCACCGAGCC CGCGGCGATGTTGATGTACGACGACGACCGCGGCACCCGGCTGACGCTCTACAGCCGCGTCGGTGACGGCAACGGCCGCA CACTCTTCCGCTTCGCCCGCGAGGGCGACATCGCTGCCTTCTCCTGGGTCGATGGTGGCATGTCCTACGTCGTCACCGGC CGCACCGACGAGGCCCGGCTGCTCACCGTCGCGCAGGCGGTCGATGCGCAGGTCCGCGGCCTCGCGCCGGATCGTCGGCA GCCATGA
Upstream 100 bases:
>100_bases GGGTGCCGCTCGGCACGGTGATGTCGCGATTGAGCCGGGCGCGCACGCGGATGCGCGGATTTCTGGAGACGGGCCGGACA GGCCTGCTGAGGAGGGTTAA
Downstream 100 bases:
>100_bases CCCTTGACCAGCTTCGCATCTTCGTGGCGGTGGCCGAGCGGCAGCACGTGACGCGGGCCGCCGAGGCGCTGAACCTCGTC CAGTCGGCGGTCAGCACGGC
Product: putative transmembrane anti-sigma factor
Products: NA
Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Protein; Transmembrane Regulator; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Sigma Factor Regulator PrtR; Transmembrane Regulator PrtR; Transmembrane Transcription Regulator
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSGDPRPVGEDDLHGLIDGRLEPERQALVEAWLAGNPARAAEVSTDRVLRERLRARLAPIAEEAIPARLRVANIRSRHLY PGASWFPMAAAAVLCLALGGAGGWVGHALHGVPAVAVAEAPATQDAVAAFRTFVVEAVHPVEVRADEKPHLVTWLSKRLG HAVAAPDLSAQGFRLMGGRLLPAGTEPAAMLMYDDDRGTRLTLYSRVGDGNGRTLFRFAREGDIAAFSWVDGGMSYVVTG RTDEARLLTVAQAVDAQVRGLAPDRRQP
Sequences:
>Translated_268_residues MSGDPRPVGEDDLHGLIDGRLEPERQALVEAWLAGNPARAAEVSTDRVLRERLRARLAPIAEEAIPARLRVANIRSRHLY PGASWFPMAAAAVLCLALGGAGGWVGHALHGVPAVAVAEAPATQDAVAAFRTFVVEAVHPVEVRADEKPHLVTWLSKRLG HAVAAPDLSAQGFRLMGGRLLPAGTEPAAMLMYDDDRGTRLTLYSRVGDGNGRTLFRFAREGDIAAFSWVDGGMSYVVTG RTDEARLLTVAQAVDAQVRGLAPDRRQP >Mature_267_residues SGDPRPVGEDDLHGLIDGRLEPERQALVEAWLAGNPARAAEVSTDRVLRERLRARLAPIAEEAIPARLRVANIRSRHLYP GASWFPMAAAAVLCLALGGAGGWVGHALHGVPAVAVAEAPATQDAVAAFRTFVVEAVHPVEVRADEKPHLVTWLSKRLGH AVAAPDLSAQGFRLMGGRLLPAGTEPAAMLMYDDDRGTRLTLYSRVGDGNGRTLFRFAREGDIAAFSWVDGGMSYVVTGR TDEARLLTVAQAVDAQVRGLAPDRRQP
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28714; Mature: 28583
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDPRPVGEDDLHGLIDGRLEPERQALVEAWLAGNPARAAEVSTDRVLRERLRARLAPI CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AEEAIPARLRVANIRSRHLYPGASWFPMAAAAVLCLALGGAGGWVGHALHGVPAVAVAEA HHHHCCCCEEEECCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECC PATQDAVAAFRTFVVEAVHPVEVRADEKPHLVTWLSKRLGHAVAAPDLSAQGFRLMGGRL CCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCEE LPAGTEPAAMLMYDDDRGTRLTLYSRVGDGNGRTLFRFAREGDIAAFSWVDGGMSYVVTG CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEC RTDEARLLTVAQAVDAQVRGLAPDRRQP CCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGDPRPVGEDDLHGLIDGRLEPERQALVEAWLAGNPARAAEVSTDRVLRERLRARLAPI CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AEEAIPARLRVANIRSRHLYPGASWFPMAAAAVLCLALGGAGGWVGHALHGVPAVAVAEA HHHHCCCCEEEECCHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECC PATQDAVAAFRTFVVEAVHPVEVRADEKPHLVTWLSKRLGHAVAAPDLSAQGFRLMGGRL CCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCEE LPAGTEPAAMLMYDDDRGTRLTLYSRVGDGNGRTLFRFAREGDIAAFSWVDGGMSYVVTG CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEC RTDEARLLTVAQAVDAQVRGLAPDRRQP CCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA